RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
SDHC-208ENST00000513009 ZC3H13Q5T200 1668 aaKnown RBP13.18□□□□□ -0.3
SDHC-208ENST00000513009 NCOA2Q15596 1464 aa13.18□□□□□ -0.3
SDHC-208ENST00000513009 RNF17Q9BXT8 1623 aaKnown RBP13.18□□□□□ -0.3
SDHC-208ENST00000513009 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
SDHC-208ENST00000513009 SYNMO15061 1565 aa13.16□□□□□ -0.3
SDHC-208ENST00000513009 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
SDHC-208ENST00000513009 EIF2AK4Q9P2K8 1649 aaKnown RBP13.15□□□□□ -0.3
SDHC-208ENST00000513009 ZNF579Q8NAF0 562 aaKnown RBP13.15□□□□□ -0.3
SDHC-208ENST00000513009 MAST1Q9Y2H9 1570 aa13.15□□□□□ -0.3
SDHC-208ENST00000513009 ABCC3O15438 1527 aa13.14□□□□□ -0.31
SDHC-208ENST00000513009 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
SDHC-208ENST00000513009 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
SDHC-208ENST00000513009 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
SDHC-208ENST00000513009 ERVK-7P63135 1459 aa13.12□□□□□ -0.31
SDHC-208ENST00000513009 MROH1Q8NDA8 1641 aa13.12□□□□□ -0.31
SDHC-208ENST00000513009 UBR1Q8IWV7 1749 aa13.11□□□□□ -0.31
SDHC-208ENST00000513009 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
SDHC-208ENST00000513009 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
SDHC-208ENST00000513009 CEP152O94986 1710 aa13.09□□□□□ -0.31
SDHC-208ENST00000513009 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
SDHC-208ENST00000513009 CLCN6P51797 869 aa13.08□□□□□ -0.32
SDHC-208ENST00000513009 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
SDHC-208ENST00000513009 ARHGAP23Q9P227 1491 aa13.08□□□□□ -0.32
SDHC-208ENST00000513009 SLIT1O75093 1534 aa13.08□□□□□ -0.32
SDHC-208ENST00000513009 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
SDHC-208ENST00000513009 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
SDHC-208ENST00000513009 LRRC9Q6ZRR7 1453 aa13.07□□□□□ -0.32
SDHC-208ENST00000513009 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
SDHC-208ENST00000513009 DUOX2Q9NRD8 1548 aa13.06□□□□□ -0.32
SDHC-208ENST00000513009 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
SDHC-208ENST00000513009 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
SDHC-208ENST00000513009 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
SDHC-208ENST00000513009 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
SDHC-208ENST00000513009 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
SDHC-208ENST00000513009 MYOM3Q5VTT5 1437 aa13.03□□□□□ -0.32
SDHC-208ENST00000513009 LOC105371045A0A1W2PR82 267 aa13.02□□□□□ -0.33
SDHC-208ENST00000513009 LTKP29376 864 aa13.02□□□□□ -0.33
SDHC-208ENST00000513009 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
SDHC-208ENST00000513009 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.33
SDHC-208ENST00000513009 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
SDHC-208ENST00000513009 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
SDHC-208ENST00000513009 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
SDHC-208ENST00000513009 PIK3C2BO00750 1634 aa13.01□□□□□ -0.33
SDHC-208ENST00000513009 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
SDHC-208ENST00000513009 FAM135BQ49AJ0 1406 aa13□□□□□ -0.33
SDHC-208ENST00000513009 ERBINQ96RT1 1412 aa13□□□□□ -0.33
SDHC-208ENST00000513009 RGS17Q9UGC6 210 aaPredicted RBP13□□□□□ -0.33
SDHC-208ENST00000513009 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
SDHC-208ENST00000513009 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
SDHC-208ENST00000513009 KIF15Q9NS87 1388 aa12.98□□□□□ -0.33
SDHC-208ENST00000513009 GALR2O43603 387 aaPredicted RBP12.98□□□□□ -0.33
SDHC-208ENST00000513009 NUBP1P53384 320 aa12.98□□□□□ -0.33
SDHC-208ENST00000513009 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
SDHC-208ENST00000513009 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
SDHC-208ENST00000513009 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
SDHC-208ENST00000513009 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
SDHC-208ENST00000513009 KANK4Q5T7N3 995 aaPredicted RBP12.96□□□□□ -0.33
SDHC-208ENST00000513009 LMTK2Q8IWU2 1503 aa12.96□□□□□ -0.33
SDHC-208ENST00000513009 ABCC5O15440 1437 aa12.96□□□□□ -0.34
SDHC-208ENST00000513009 TET3O43151 1660 aa12.96□□□□□ -0.34
SDHC-208ENST00000513009 ROBO1Q9Y6N7 1651 aa12.96□□□□□ -0.34
SDHC-208ENST00000513009 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
SDHC-208ENST00000513009 KCNA6P17658 529 aa12.94□□□□□ -0.34
SDHC-208ENST00000513009 PTPN23Q9H3S7 1636 aa12.94□□□□□ -0.34
SDHC-208ENST00000513009 NWD1Q149M9 1564 aa12.94□□□□□ -0.34
SDHC-208ENST00000513009 KANK1Q14678 1352 aa12.94□□□□□ -0.34
SDHC-208ENST00000513009 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
SDHC-208ENST00000513009 DAPK1P53355 1430 aa12.92□□□□□ -0.34
SDHC-208ENST00000513009 IDI1Q13907 227 aa12.92□□□□□ -0.34
SDHC-208ENST00000513009 RRP7BPQ9NSQ0 103 aa12.92□□□□□ -0.34
SDHC-208ENST00000513009 NOS1P29475 1434 aa12.91□□□□□ -0.34
SDHC-208ENST00000513009 ADGRB3O60242 1522 aa12.91□□□□□ -0.34
SDHC-208ENST00000513009 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
SDHC-208ENST00000513009 PROSER2Q86WR7 435 aaPredicted RBP12.9□□□□□ -0.34
SDHC-208ENST00000513009 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
SDHC-208ENST00000513009 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
SDHC-208ENST00000513009 KIF12Q96FN5 646 aa12.88□□□□□ -0.35
SDHC-208ENST00000513009 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
SDHC-208ENST00000513009 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
SDHC-208ENST00000513009 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
SDHC-208ENST00000513009 MSH6P52701 1360 aa12.87□□□□□ -0.35
SDHC-208ENST00000513009 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
SDHC-208ENST00000513009 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
SDHC-208ENST00000513009 FGD6Q6ZV73 1430 aa12.87□□□□□ -0.35
SDHC-208ENST00000513009 RPRD2Q5VT52 1461 aaKnown RBP12.86□□□□□ -0.35
SDHC-208ENST00000513009 JCADQ9P266 1359 aa12.85□□□□□ -0.35
SDHC-208ENST00000513009 ZFYVE9O95405 1425 aa12.85□□□□□ -0.35
SDHC-208ENST00000513009 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
SDHC-208ENST00000513009 ADGRL2O95490 1459 aa12.85□□□□□ -0.35
SDHC-208ENST00000513009 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
SDHC-208ENST00000513009 SLAIN2Q9P270 581 aa12.84□□□□□ -0.35
SDHC-208ENST00000513009 SETD1AO15047 1707 aaKnown RBP12.84□□□□□ -0.35
SDHC-208ENST00000513009 COL16A1Q07092 1604 aaPredicted RBP12.84□□□□□ -0.35
SDHC-208ENST00000513009 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.35
SDHC-208ENST00000513009 PLEKHG1Q9ULL1 1385 aa12.83□□□□□ -0.36
SDHC-208ENST00000513009 NCOA3Q9Y6Q9 1424 aa12.83□□□□□ -0.36
SDHC-208ENST00000513009 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
SDHC-208ENST00000513009 MAP3K13O43283 966 aa12.81□□□□□ -0.36
SDHC-208ENST00000513009 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms