RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
ECHDC1-207ENST00000430841 WASHC2CQ9Y4E1 1318 aa12.59□□□□□ -0.39
ECHDC1-207ENST00000430841 KIF3BO15066 747 aa12.58□□□□□ -0.4
ECHDC1-207ENST00000430841 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
ECHDC1-207ENST00000430841 PZPP20742 1482 aa12.57□□□□□ -0.4
ECHDC1-207ENST00000430841 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 RTEL1-TNFRSF6BF6WH68 1400 aa12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 NLRP1Q9C000 1473 aa12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
ECHDC1-207ENST00000430841 NPHP4O75161 1426 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-207ENST00000430841 DHX29Q7Z478 1369 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-207ENST00000430841 RNF17Q9BXT8 1623 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-207ENST00000430841 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
ECHDC1-207ENST00000430841 MAMSTRQ6ZN01 415 aa12.54□□□□□ -0.4
ECHDC1-207ENST00000430841 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
ECHDC1-207ENST00000430841 SYNMO15061 1565 aa12.54□□□□□ -0.4
ECHDC1-207ENST00000430841 DEPDC5O75140 1603 aa12.53□□□□□ -0.4
ECHDC1-207ENST00000430841 KIF12Q96FN5 646 aa12.53□□□□□ -0.4
ECHDC1-207ENST00000430841 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-207ENST00000430841 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-207ENST00000430841 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 ZNF644Q9H582 1327 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 CAMSAP2Q08AD1 1489 aa12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 VWDEQ8N2E2 1590 aa12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 ZC3H13Q5T200 1668 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-207ENST00000430841 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
ECHDC1-207ENST00000430841 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
ECHDC1-207ENST00000430841 COLQQ9Y215 455 aaPredicted RBP12.5□□□□□ -0.41
ECHDC1-207ENST00000430841 CEP162Q5TB80 1403 aa12.49□□□□□ -0.41
ECHDC1-207ENST00000430841 MED14O60244 1454 aa12.48□□□□□ -0.41
ECHDC1-207ENST00000430841 MBD5Q9P267 1494 aa12.48□□□□□ -0.41
ECHDC1-207ENST00000430841 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
ECHDC1-207ENST00000430841 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
ECHDC1-207ENST00000430841 LRRC7Q96NW7 1537 aa12.45□□□□□ -0.42
ECHDC1-207ENST00000430841 NCOA2Q15596 1464 aa12.45□□□□□ -0.42
ECHDC1-207ENST00000430841 ARHGEF5Q12774 1597 aa12.44□□□□□ -0.42
ECHDC1-207ENST00000430841 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
ECHDC1-207ENST00000430841 EIF2AK4Q9P2K8 1649 aaKnown RBP12.44□□□□□ -0.42
ECHDC1-207ENST00000430841 ABCC3O15438 1527 aa12.43□□□□□ -0.42
ECHDC1-207ENST00000430841 ERVK-7P63135 1459 aa12.43□□□□□ -0.42
ECHDC1-207ENST00000430841 PROM2Q8N271 834 aa12.43□□□□□ -0.42
ECHDC1-207ENST00000430841 MAP3K13O43283 966 aa12.42□□□□□ -0.42
ECHDC1-207ENST00000430841 CEP152O94986 1710 aa12.41□□□□□ -0.42
ECHDC1-207ENST00000430841 UBR1Q8IWV7 1749 aa12.4□□□□□ -0.42
ECHDC1-207ENST00000430841 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
ECHDC1-207ENST00000430841 STRCP1A6NGW2 1772 aa12.4□□□□□ -0.42
ECHDC1-207ENST00000430841 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-207ENST00000430841 TXNDC2Q86VQ3 553 aa12.39□□□□□ -0.43
ECHDC1-207ENST00000430841 ALKQ9UM73 1620 aa12.38□□□□□ -0.43
ECHDC1-207ENST00000430841 BCANQ96GW7 911 aa12.38□□□□□ -0.43
ECHDC1-207ENST00000430841 KANK1Q14678 1352 aa12.38□□□□□ -0.43
ECHDC1-207ENST00000430841 MAST1Q9Y2H9 1570 aa12.38□□□□□ -0.43
ECHDC1-207ENST00000430841 LRRC9Q6ZRR7 1453 aa12.37□□□□□ -0.43
ECHDC1-207ENST00000430841 TTLL13PA6NNM8 815 aa12.36□□□□□ -0.43
ECHDC1-207ENST00000430841 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
ECHDC1-207ENST00000430841 DUOX2Q9NRD8 1548 aa12.36□□□□□ -0.43
ECHDC1-207ENST00000430841 TIE1P35590 1138 aa12.35□□□□□ -0.43
ECHDC1-207ENST00000430841 SLIT1O75093 1534 aa12.34□□□□□ -0.43
ECHDC1-207ENST00000430841 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
ECHDC1-207ENST00000430841 MYOM3Q5VTT5 1437 aa12.33□□□□□ -0.44
ECHDC1-207ENST00000430841 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 MSH6P52701 1360 aa12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 KIF15Q9NS87 1388 aa12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 FAM135BQ49AJ0 1406 aa12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 MEX3CQ5U5Q3 659 aaKnown RBP12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 PROSER2Q86WR7 435 aaPredicted RBP12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 EFCAB6Q5THR3 1501 aa12.32□□□□□ -0.44
ECHDC1-207ENST00000430841 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
ECHDC1-207ENST00000430841 ERBINQ96RT1 1412 aa12.31□□□□□ -0.44
ECHDC1-207ENST00000430841 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
ECHDC1-207ENST00000430841 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
ECHDC1-207ENST00000430841 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
ECHDC1-207ENST00000430841 LTKP29376 864 aa12.3□□□□□ -0.44
ECHDC1-207ENST00000430841 C14orf37Q86TY3 774 aa12.3□□□□□ -0.44
ECHDC1-207ENST00000430841 PHLPP1O60346 1717 aa12.3□□□□□ -0.44
ECHDC1-207ENST00000430841 TMEM2Q9UHN6 1383 aa12.3□□□□□ -0.44
ECHDC1-207ENST00000430841 NKTRP30414 1462 aaKnown RBP12.29□□□□□ -0.44
ECHDC1-207ENST00000430841 ST18O60284 1047 aa12.29□□□□□ -0.44
ECHDC1-207ENST00000430841 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
ECHDC1-207ENST00000430841 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
ECHDC1-207ENST00000430841 CROCC2H7BZ55 1655 aa12.28□□□□□ -0.44
ECHDC1-207ENST00000430841 KDM5AP29375 1690 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-207ENST00000430841 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-207ENST00000430841 KCNA6P17658 529 aa12.27□□□□□ -0.45
ECHDC1-207ENST00000430841 RRP7BPQ9NSQ0 103 aa12.27□□□□□ -0.45
ECHDC1-207ENST00000430841 RGS17Q9UGC6 210 aaPredicted RBP12.27□□□□□ -0.45
ECHDC1-207ENST00000430841 JCADQ9P266 1359 aa12.27□□□□□ -0.45
ECHDC1-207ENST00000430841 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
ECHDC1-207ENST00000430841 POTEAQ6S8J7 498 aa12.26□□□□□ -0.45
ECHDC1-207ENST00000430841 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
ECHDC1-207ENST00000430841 ADGRB3O60242 1522 aa12.26□□□□□ -0.45
ECHDC1-207ENST00000430841 HDGFP51858 240 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms