RNA–Protein interactions for RNA: ENST00000637175.1

ATRX-223, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-223	ENST00000637175	EFEMP1	Q12805	493 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	TCF15	Q12870	199 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	POLD3	Q15054	466 aa	Predicted RBP	3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	SAFB	Q15424	915 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	CDSN	Q15517	529 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	KIAA0753	Q2KHM9	967 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	COBLL1	Q53SF7	1204 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	RNF220	Q5VTB9	566 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	AGAP9	Q5VTM2	703 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	DARS2	Q6PI48	645 aa	Known RBP	3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	KSR2	Q6VAB6	950 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	FITM2	Q8N6M3	262 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	C1QTNF3	Q9BXJ4	246 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	GPR87	Q9BY21	358 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	DPH1	Q9BZG8	443 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	GSTO2	Q9H4Y5	243 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	GPR35	Q9HC97	309 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	SARS2	Q9NP81	518 aa	Known RBP	3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	CHST12	Q9NRB3	414 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	CFAP97	Q9P2B7	532 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	SLC45A2	Q9UMX9	530 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	MED16	Q9Y2X0	877 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	TCAF1	Q9Y4C2	921 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	CHST2	Q9Y4C5	530 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	TESMIN	Q9Y4I5	508 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175	XDH	P47989	1333 aa		3.9	□□□□□ -1.79
ATRX-223	ENST00000637175		A0A1W2PPL8	197 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	CFAP69	A5D8W1	941 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	CDHR4	A6H8M9	788 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	DIRC3	C9JPN6	131 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	TRIM24	O15164	1050 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	PMM2	O15305	246 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	FOXD2	O60548	495 aa	Predicted RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	ITGB1	P05556	798 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	GJB1	P08034	283 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	GNAI3	P08754	354 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	RARB	P10826	455 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	MYF5	P13349	255 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	HDC	P19113	662 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	EN2	P19622	333 aa	Predicted RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	HIBADH	P31937	336 aa	Known RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	PTTG1IP	P53801	180 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	SOX8	P57073	446 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	GNAI1	P63096	354 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	EXOSC9	Q06265	439 aa	Known RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	RRP1B	Q14684	758 aa	Known RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	KHDC1L	Q5JSQ8	128 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	UTP14C	Q5TAP6	766 aa	Known RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	ERICH6B	Q5W0A0	696 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	MED25	Q71SY5	747 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	RHOT2	Q8IXI1	618 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	GSPT2	Q8IYD1	628 aa	Known RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	TMIE	Q8NEW7	156 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	SVIP	Q8NHG7	77 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	NUP133	Q8WUM0	1156 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	KBTBD7	Q8WVZ9	684 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	SCAMP4	Q969E2	229 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	APIP	Q96GX9	242 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	C8orf49	Q96NF6	230 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	KLHL32	Q96NJ5	620 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	ADO	Q96SZ5	270 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	TRIM54	Q9BYV2	358 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	KLC2	Q9H0B6	622 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	BTBD1	Q9H0C5	482 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	BRD9	Q9H8M2	597 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	RSAD1	Q9HA92	442 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	PIH1D1	Q9NWS0	290 aa	Known RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	SMPD4	Q9NXE4	827 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	POGK	Q9P215	609 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	PCDHA6	Q9UN73	950 aa		3.89	□□□□□ -1.79
ATRX-223	ENST00000637175	ISM1	B1AKI9	464 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175		E9PLN8	166 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	TBX3	O15119	743 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	MUSK	O15146	869 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	AGFG2	O95081	481 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	MAP4K4	O95819	1239 aa	Predicted RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	CHEK2	O96017	543 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	CKB	P12277	381 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	FCER1A	P12319	257 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	APOBEC3A	P31941	199 aa	Predicted RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	MAGEA10	P43363	369 aa	Predicted RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	NOMO3	P69849	1222 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	ADAM17	P78536	824 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	NHLH2	Q02577	135 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	TOB2	Q14106	344 aa	Predicted RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	UBE4A	Q14139	1066 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	PRKD1	Q15139	912 aa	Predicted RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	NOMO2	Q5JPE7	1267 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	LCE3B	Q5TA77	95 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	ZNF585A	Q6P3V2	769 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	LRRC55	Q6ZSA7	311 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	PPP1R32	Q7Z5V6	425 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	C11orf96	Q7Z7L8	435 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	TMPRSS6	Q8IU80	811 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	CCAR1	Q8IX12	1150 aa	Known RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	TBC1D15	Q8TC07	691 aa		3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	TNPO1	Q92973	898 aa	Known RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	DVL3	Q92997	716 aa	Predicted RBP	3.88	□□□□□ -1.79
ATRX-223	ENST00000637175	PGBD4	Q96DM1	585 aa		3.88	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms