RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SGSM1Q2NKQ1 1148 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 GLE1Q53GS7 698 aaKnown RBP18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 C17orf99Q6UX52 265 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 CPNE8Q86YQ8 564 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 IFNL1Q8IU54 200 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 ALG3Q92685 438 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 NIF3L1Q9GZT8 377 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZCCHC17Q9NP64 241 aaKnown RBP18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 ST7Q9NRC1 585 aa18.55■□□□□ 0.56
PCDHGC3-205ENST00000617641 A6NJR5 290 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 LACTBL1A8MY62 500 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 IL18RAPO95256 599 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 CYP1A1P04798 512 aaPredicted RBP18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 NFICP08651 508 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 CD58P19256 250 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 COMTP21964 271 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 FGFR4P22455 802 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF699Q32M78 642 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 MAP9Q49MG5 647 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 SCARA5Q6ZMJ2 495 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 TLK2Q86UE8 772 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 MCOLN2Q8IZK6 566 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 XYLT2Q9H1B5 865 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 UVRAGQ9P2Y5 699 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 THAP12O43422 761 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 TSPAN1O60635 241 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 TNNC1P63316 161 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 TMEM62Q0P6H9 643 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF211Q13398 564 aaPredicted RBP18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 CASP8Q14790 479 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 C2CD6Q53TS8 623 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 PHLDB2Q86SQ0 1253 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 RUBCNQ92622 972 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 USP6NLQ92738 828 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 KRT35Q92764 455 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZBTB9Q96C00 473 aa18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 FAM49AQ9H0Q0 323 aaPredicted RBP18.54■□□□□ 0.56
PCDHGC3-205ENST00000617641 GLI1P08151 1106 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 SMIM10L2AP0DMW4 78 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 SMIM10L2BP0DMW5 78 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 TNNT3P45378 269 aaPredicted RBP18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 MARCKSL1P49006 195 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF132P52740 706 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 KIZQ2M2Z5 673 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 KAT2BQ92831 832 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 GDAP1L1Q96MZ0 367 aa18.53■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZSCAN5CA6NGD5 496 aaPredicted RBP18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 KRIT1O00522 736 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 ERLIN2O94905 339 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 F2P00734 622 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 KRT19P08727 400 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 WEE2P0C1S8 567 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 ITGA4P13612 1032 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 NSFP46459 744 aaKnown RBP18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 CENPCQ03188 943 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 JADE1Q6IE81 842 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 LLGL2Q6P1M3 1020 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 RNPC3Q96LT9 517 aaKnown RBP18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 CARD9Q9H257 536 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 CISHQ9NSE2 258 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 SIX4Q9UIU6 781 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 GINS2Q9Y248 185 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 RRN3P2A6NIE6 340 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 RAD51CO43502 376 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 HEXIM1O94992 359 aaKnown RBP18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 FGGP02679 453 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 SLC10A3P09131 477 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 NOMO3P69849 1222 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZNF394Q53GI3 561 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 RPS6KC1Q96S38 1066 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 ZSWIM1Q9BR11 485 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
PCDHGC3-205ENST00000617641 MIF4GDA9UHW6 222 aaKnown RBP18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 RRM1P23921 792 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 ASPAP45381 313 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 MON1BQ7L1V2 547 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 ZNF410Q86VK4 478 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 C1orf127Q8N9H9 656 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 TRIM7Q9C029 511 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 NXF1Q9UBU9 619 aaKnown RBP18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 TTC7AQ9ULT0 858 aaPredicted RBP18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 GUCY2DQ02846 1103 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 SLC10A6Q3KNW5 377 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 AADACL2Q6P093 401 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 TRIM72Q6ZMU5 477 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 UBL4BQ8N7F7 174 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 AENQ8WTP8 325 aaKnown RBP18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 ZNF606Q8WXB4 792 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 CD101Q93033 1021 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 C11orf70Q9BRQ4 267 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 DDX47Q9H0S4 455 aaKnown RBP18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 ANAPC7Q9UJX3 599 aa18.51■□□□□ 0.55
PCDHGC3-205ENST00000617641 ESYT3A0FGR9 886 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 SPOPO43791 374 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 RGS2P41220 211 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 SMC1AQ14683 1233 aaKnown RBP18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 MFSD10Q14728 455 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 UBXN6Q9BZV1 441 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 ADAMTS10Q9H324 1103 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 EPB41L5Q9HCM4 733 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms