RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	SHC3	Q92529	594 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	EXOC1L	A0A1B0GW35	172 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	PIK3CD	O00329	1044 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	TP73	O15350	636 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	DPEP1	P16444	411 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	ARSE	P51690	589 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	TMEM63B	Q5T3F8	832 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	CNKSR2	Q8WXI2	1034 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	RUBCN	Q92622	972 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	SGSM3	Q96HU1	749 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	TXLNGY	Q9BZA5	131 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	HAPLN2	Q9GZV7	340 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	WNT8A	Q9H1J5	351 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	SEL1L	Q9UBV2	794 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	HAO1	Q9UJM8	370 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	NUB1	Q9Y5A7	615 aa		15.73	■□□□□ 0.11
PRPF8-216	ENST00000577001	ENTPD3	O75355	529 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	CBX6	O95503	412 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	MMP14	P50281	582 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	PSMC5	P62195	406 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	CYP24A1	Q07973	514 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	SLC27A3	Q5K4L6	730 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	ZC3H18	Q86VM9	953 aa	Known RBP	15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	VSIG1	Q86XK7	387 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	AGAP11	Q8TF27	550 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	OSBPL8	Q9BZF1	889 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	CXorf56	Q9H5V9	222 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	ZBTB7A	O95365	584 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	ICAM1	P05362	532 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	GTF2H1	P32780	548 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	SP2	Q02086	613 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	CCDC91	Q7Z6B0	441 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	KIFAP3	Q92845	792 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	PAGR1	Q9BTK6	254 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	XPNPEP1	Q9NQW7	623 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	CNTNAP1	P78357	1384 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	MIF4GD	A9UHW6	222 aa	Known RBP	15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	CHUK	O15111	745 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	RARG	P13631	454 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	PEX19	P40855	299 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	MIS18BP1	Q6P0N0	1132 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	PSPC1	Q8WXF1	523 aa	Known RBP	15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	ART4	Q93070	314 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	DCLK3	Q9C098	648 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	ETNK1	Q9HBU6	452 aa		15.72	■□□□□ 0.11
PRPF8-216	ENST00000577001	WDR64	B1ANS9	1081 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	GRIN3B	O60391	1043 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	CD48	P09326	243 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	CA4	P22748	312 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	CPA2	P48052	419 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	CLEC16A	Q2KHT3	1053 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	BBS9	Q3SYG4	887 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	TAS1R3	Q7RTX0	852 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	HSPH1	Q92598	858 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	MSTO1	Q9BUK6	570 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	MTMR12	Q9C0I1	747 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	NKIRAS1	Q9NYS0	192 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	RBAK	Q9NYW8	714 aa	Predicted RBP	15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	FEM1B	Q9UK73	627 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	TAF1L	Q8IZX4	1826 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	PODXL	O00592	558 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	EIF3B	P55884	814 aa	Known RBP	15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	PCNX4	Q63HM2	1172 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	ERICH1	Q86X53	443 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	ASAP3	Q8TDY4	903 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	DDX1	Q92499	740 aa	Known RBP	15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	PITPNM3	Q9BZ71	974 aa		15.71	■□□□□ 0.11
PRPF8-216	ENST00000577001	MAST2	Q6P0Q8	1798 aa		15.71	■□□□□ 0.1
PRPF8-216	ENST00000577001	ATP6V1G2	O95670	118 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	GAS8	O95995	478 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	PDIA2	Q13087	525 aa	Known RBP	15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	GPD1L	Q8N335	351 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	RBBP8NL	Q8NC74	664 aa	Predicted RBP	15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	NSMCE1	Q8WV22	266 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	ERP27	Q96DN0	273 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	RIT2	Q99578	217 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	TMEM8A	Q9HCN3	771 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	HERC5	Q9UII4	1024 aa	Known RBP	15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	AGO2	Q9UKV8	859 aa	Known RBP	15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	AGTPBP1	Q9UPW5	1226 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001		K7ERI5	159 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	AVIL	O75366	819 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	ASNS	P08243	561 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	PECAM1	P16284	738 aa	Predicted RBP	15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	NT5C2	P49902	561 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	GTF2B	Q00403	316 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	MGAT5	Q09328	741 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	ALCAM	Q13740	583 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	EML3	Q32P44	896 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	DEPTOR	Q8TB45	409 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	CD101	Q93033	1021 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	SNF8	Q96H20	258 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	PXMP2	Q9NR77	195 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	PCDHA10	Q9Y5I2	948 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	CES2	O00748	559 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	SNX3	O60493	162 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	ARHGAP27	Q6ZUM4	889 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	WRNIP1	Q96S55	665 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	HOMER3	Q9NSC5	361 aa		15.7	■□□□□ 0.1
PRPF8-216	ENST00000577001	CCDC195	A0A1B0GUA6	201 aa		15.69	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms