RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 H3BQ06 376 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 M0QZQ0 153 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 ADAM12O43184 909 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 TBC1D4O60343 1298 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 EXOC3O60645 756 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 SMC2O95347 1197 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 NR3C1P04150 777 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 URODP06132 367 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 EPCAMP16422 314 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 KCNA5P22460 613 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 KLRC2P26717 231 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 CA8P35219 290 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 AARSP49588 968 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 KCNQ1P51787 676 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLCN4P51793 760 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 LILRA4P59901 499 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 TFAMQ00059 246 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 CYP24A1Q07973 514 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 ELAVL2Q12926 359 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 MORC3Q14149 939 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 MYBPC2Q14324 1141 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 BMS1Q14692 1282 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 PSMD6Q15008 389 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 NFIL3Q16649 462 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 LEXMQ3ZCV2 418 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 ANKRD40Q6AI12 368 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 CENPPQ6IPU0 288 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 LLGL2Q6P1M3 1020 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 LILRA6Q6PI73 481 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 SYCE2Q6PIF2 218 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 EP400NLQ6ZTU2 488 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 C1orf127Q8N9H9 656 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 GOLGA5Q8TBA6 731 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 GPT2Q8TD30 523 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 PIK3R5Q8WYR1 880 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 PPP2R3CQ969Q6 453 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 MSLNLQ96KJ4 702 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 SUSD3Q96L08 255 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 ASB2Q96Q27 587 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 S1PR5Q9H228 398 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 INTS13Q9NVM9 706 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 RMND1Q9NWS8 449 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 FNIP2Q9P278 1114 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 THEGQ9P2T0 379 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 HOOK1Q9UJC3 728 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 BARX2Q9UMQ3 279 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 SSX2IPQ9Y2D8 614 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 NUB1Q9Y5A7 615 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 TIMM13Q9Y5L4 95 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 VWA8A3KMH1 1905 aa9.41□□□□□ -0.9
TRAPPC1-203ENST00000571739 SCN1AP35498 2009 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 BIN1O00499 593 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 XPOTO43592 962 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 TRAPPC3O43617 180 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 CALUO43852 315 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 AKAP3O75969 853 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIF20AO95235 890 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 MCM4P33991 863 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 DLG4P78352 724 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLDN10P78369 228 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 MRPS5P82675 430 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 ADAM9Q13443 819 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 SURF1Q15526 300 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 ANKRD54Q6NXT1 300 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 GLYCTKQ8IVS8 523 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 PARD3BQ8TEW8 1205 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 CACTINQ8WUQ7 758 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 EEF2KMTQ96G04 330 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 EMILIN2Q9BXX0 1053 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 AGAP1Q9UPQ3 857 aa9.4□□□□□ -0.9
TRAPPC1-203ENST00000571739 EYSQ5T1H1 3165 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 GRXCR2A6NFK2 248 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 LRRIQ3A6PVS8 624 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 SYN3O14994 580 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 TGM5O43548 720 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 C4BPAP04003 597 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 ITGB3P05106 788 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 DLATP10515 647 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 NR2F2P24468 414 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 POLR2BP30876 1174 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 OR1D2P34982 312 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 NDUFV1P49821 464 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 CLUL1Q15846 466 aa9.39□□□□□ -0.91
TRAPPC1-203ENST00000571739 PSMD5Q16401 504 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms