RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 TIGD5Q53EQ6 642 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 CT47A1Q5JQC4 288 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-227ENST00000513159 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
PTPN20-227ENST00000513159 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 TRAPPC11Q7Z392 1133 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 TRIM59Q8IWR1 403 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 DHX40Q8IX18 779 aaKnown RBP11.18□□□□□ -0.62
PTPN20-227ENST00000513159 B3GALT6Q96L58 329 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 FRMD4BQ9Y2L6 1034 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
PTPN20-227ENST00000513159 IKBKBO14920 756 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 FSCN2O14926 492 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 LILRB3O75022 631 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 B3GAT3O94766 335 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 LETM1O95202 739 aaPredicted RBP11.17□□□□□ -0.62
PTPN20-227ENST00000513159 EPB41P11171 864 aaKnown RBP11.17□□□□□ -0.62
PTPN20-227ENST00000513159 TNNI1P19237 187 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
PTPN20-227ENST00000513159 GCLMP48507 274 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 LILRA4P59901 499 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 ENPEPQ07075 957 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 DUOXA2Q1HG44 320 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 ZACNQ401N2 412 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 HSP90AA4PQ58FG1 418 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 FUT10Q6P4F1 479 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 APTXQ7Z2E3 356 aaKnown RBP11.17□□□□□ -0.62
PTPN20-227ENST00000513159 FRMD5Q7Z6J6 570 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
PTPN20-227ENST00000513159 BEST2Q8NFU1 509 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
PTPN20-227ENST00000513159 UROC1Q96N76 676 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 ZBP1Q9H171 429 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 XYLT2Q9H1B5 865 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 CHST7Q9NS84 486 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 MTMR10Q9NXD2 777 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 NFE2L3Q9Y4A8 694 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 PTPRDP23468 1912 aa11.17□□□□□ -0.62
PTPN20-227ENST00000513159 CCDC192P0DO97 292 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 ZNF18P17022 549 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-227ENST00000513159 PPM1AP35813 382 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 MYL6P60660 151 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 RTP2Q5QGT7 225 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 LIMS2Q7Z4I7 341 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 AOPEPQ8N6M6 819 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 TAS1R2Q8TE23 839 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 SUSD3Q96L08 255 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 CNOT6LQ96LI5 555 aaKnown RBP11.16□□□□□ -0.62
PTPN20-227ENST00000513159 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-227ENST00000513159 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 C11orf84Q9BUA3 381 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-227ENST00000513159 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 FANCLQ9NW38 375 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-227ENST00000513159 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 AGAP1Q9UPQ3 857 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 NME7Q9Y5B8 376 aa11.16□□□□□ -0.62
PTPN20-227ENST00000513159 HIDE1A8MVS5 230 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 M0QZQ0 153 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-227ENST00000513159 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
PTPN20-227ENST00000513159 CSPG5O95196 566 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 HLA-DRAP01903 254 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 SOD2P04179 222 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 TMEM191BP0C7N4 346 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 FGFR3P22607 806 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
PTPN20-227ENST00000513159 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 VPS52Q8N1B4 723 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 DEFB123Q8N688 67 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 LMO3Q8TAP4 145 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 CACTINQ8WUQ7 758 aaKnown RBP11.15□□□□□ -0.62
PTPN20-227ENST00000513159 MYLIPQ8WY64 445 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 TMEM169Q96HH4 297 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 ANKRD36BP1Q96IX9 119 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 SENP8Q96LD8 212 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 CBX8Q9HC52 389 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 METTL14Q9HCE5 456 aaKnown RBP11.15□□□□□ -0.62
PTPN20-227ENST00000513159 ITGA11Q9UKX5 1188 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
PTPN20-227ENST00000513159 MTCH2Q9Y6C9 303 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms