RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 SURF1Q15526 300 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 TIGD5Q53EQ6 642 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 CT47A1Q5JQC4 288 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 INTS8Q75QN2 995 aaKnown RBP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 TRAPPC11Q7Z392 1133 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 TRIM59Q8IWR1 403 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 DHX40Q8IX18 779 aaKnown RBP11.18□□□□□ -0.62
PTPN20-220ENST00000508715 B3GALT6Q96L58 329 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 FRMD4BQ9Y2L6 1034 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
PTPN20-220ENST00000508715 IKBKBO14920 756 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 FSCN2O14926 492 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 LILRB3O75022 631 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 B3GAT3O94766 335 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 LETM1O95202 739 aaPredicted RBP11.17□□□□□ -0.62
PTPN20-220ENST00000508715 EPB41P11171 864 aaKnown RBP11.17□□□□□ -0.62
PTPN20-220ENST00000508715 TNNI1P19237 187 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
PTPN20-220ENST00000508715 GCLMP48507 274 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 LILRA4P59901 499 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 ENPEPQ07075 957 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 DUOXA2Q1HG44 320 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 ZACNQ401N2 412 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 HSP90AA4PQ58FG1 418 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 ZNF697Q5TEC3 545 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 FUT10Q6P4F1 479 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 APTXQ7Z2E3 356 aaKnown RBP11.17□□□□□ -0.62
PTPN20-220ENST00000508715 FRMD5Q7Z6J6 570 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
PTPN20-220ENST00000508715 BEST2Q8NFU1 509 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
PTPN20-220ENST00000508715 UROC1Q96N76 676 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 FNBP1Q96RU3 617 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 ZBP1Q9H171 429 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 XYLT2Q9H1B5 865 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 AAASQ9NRG9 546 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 CHST7Q9NS84 486 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 MTMR10Q9NXD2 777 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 NFE2L3Q9Y4A8 694 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 PTPRDP23468 1912 aa11.17□□□□□ -0.62
PTPN20-220ENST00000508715 CCDC192P0DO97 292 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 ZNF18P17022 549 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-220ENST00000508715 PPM1AP35813 382 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 MYL6P60660 151 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 RTP2Q5QGT7 225 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 LIMS2Q7Z4I7 341 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 AOPEPQ8N6M6 819 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 TAS1R2Q8TE23 839 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 SUSD3Q96L08 255 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 CNOT6LQ96LI5 555 aaKnown RBP11.16□□□□□ -0.62
PTPN20-220ENST00000508715 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-220ENST00000508715 BPIFA3Q9BQP9 254 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 C11orf84Q9BUA3 381 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-220ENST00000508715 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 FANCLQ9NW38 375 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
PTPN20-220ENST00000508715 DACH1Q9UI36 760 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 AGAP1Q9UPQ3 857 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 NME7Q9Y5B8 376 aa11.16□□□□□ -0.62
PTPN20-220ENST00000508715 HIDE1A8MVS5 230 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 M0QZQ0 153 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-220ENST00000508715 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
PTPN20-220ENST00000508715 CSPG5O95196 566 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 HLA-DRAP01903 254 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 SOD2P04179 222 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 TMEM191BP0C7N4 346 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 FGFR3P22607 806 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
PTPN20-220ENST00000508715 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 MIIPQ5JXC2 388 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 VPS52Q8N1B4 723 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 DEFB123Q8N688 67 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 LMO3Q8TAP4 145 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 CACTINQ8WUQ7 758 aaKnown RBP11.15□□□□□ -0.62
PTPN20-220ENST00000508715 MYLIPQ8WY64 445 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 TMEM169Q96HH4 297 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 ANKRD36BP1Q96IX9 119 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 SENP8Q96LD8 212 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 CBX8Q9HC52 389 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 METTL14Q9HCE5 456 aaKnown RBP11.15□□□□□ -0.62
PTPN20-220ENST00000508715 ITGA11Q9UKX5 1188 aa11.15□□□□□ -0.62
PTPN20-220ENST00000508715 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms