RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PHACTR3Q96KR7 559 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 TBCBQ99426 244 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 MPHOSPH9Q99550 1183 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 CPEB1Q9BZB8 566 aaKnown RBP7.34□□□□□ -1.23
HERC4-213ENST00000506515 BRD9Q9H8M2 597 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 RSAD1Q9HA92 442 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 PARD6AQ9NPB6 346 aa7.34□□□□□ -1.23
HERC4-213ENST00000506515 PIH1D1Q9NWS0 290 aaKnown RBP7.34□□□□□ -1.23
HERC4-213ENST00000506515 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.34□□□□□ -1.23
HERC4-213ENST00000506515 HECAQ9UBI9 543 aaPredicted RBP7.34□□□□□ -1.23
HERC4-213ENST00000506515 ARID4BQ4LE39 1312 aaPredicted RBP7.33□□□□□ -1.24
HERC4-213ENST00000506515 BTBD11A6QL63 1104 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 SLC43A1O75387 559 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 IPO13O94829 963 aaKnown RBP7.33□□□□□ -1.24
HERC4-213ENST00000506515 ALAS1P13196 640 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 BRAFP15056 766 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 CSRP2Q16527 193 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 UTP14CQ5TAP6 766 aaKnown RBP7.33□□□□□ -1.24
HERC4-213ENST00000506515 PCSK9Q8NBP7 692 aaKnown RBP7.33□□□□□ -1.24
HERC4-213ENST00000506515 TNIP3Q96KP6 325 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 MRGPRX1Q96LB2 322 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 STRBPQ96SI9 672 aaKnown RBP7.33□□□□□ -1.24
HERC4-213ENST00000506515 P2RX7Q99572 595 aaKnown RBP7.33□□□□□ -1.24
HERC4-213ENST00000506515 KIAA1586Q9HCI6 787 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 JKAMPQ9P055 326 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 SLC45A2Q9UMX9 530 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 CORO2BQ9UQ03 480 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 SNX13Q9Y5W8 968 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.33□□□□□ -1.24
HERC4-213ENST00000506515 SLC30A1Q9Y6M5 507 aa7.33□□□□□ -1.24
HERC4-213ENST00000506515 CDHR4A6H8M9 788 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 RHPN2P1A8MT19 583 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 FRS3O43559 492 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 HAUS5O94927 633 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 GJB1P08034 283 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 SLC6A2P23975 617 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 PIK3CBP42338 1070 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 AK2P54819 239 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 PSMC1P62191 440 aaKnown RBP7.32□□□□□ -1.24
HERC4-213ENST00000506515 HHEXQ03014 270 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 ZFYVE27Q5T4F4 411 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 GPRIN1Q7Z2K8 1008 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 SGMS1Q86VZ5 419 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 KRT78Q8N1N4 520 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 MDGA1Q8NFP4 955 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 ATXN2LQ8WWM7 1075 aaKnown RBP7.32□□□□□ -1.24
HERC4-213ENST00000506515 ELAC2Q9BQ52 826 aaKnown RBP7.32□□□□□ -1.24
HERC4-213ENST00000506515 KLHL11Q9NVR0 708 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 CPNE7Q9UBL6 633 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 ZDHHC8Q9ULC8 765 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
HERC4-213ENST00000506515 PRSS29PA6NIE9 313 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 CAPN14A8MX76 684 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 TBX3O15119 743 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 ITGB1P05556 798 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 SUMO3P55854 103 aaPredicted RBP7.31□□□□□ -1.24
HERC4-213ENST00000506515 IFIT5Q13325 482 aaKnown RBP7.31□□□□□ -1.24
HERC4-213ENST00000506515 ZNF365Q70YC5 407 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 MED25Q71SY5 747 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 POLNQ7Z5Q5 900 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 SRLQ86TD4 932 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 GSPT2Q8IYD1 628 aaKnown RBP7.31□□□□□ -1.24
HERC4-213ENST00000506515 FITM2Q8N6M3 262 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 AOPEPQ8N6M6 819 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 OR10H5Q8NGA6 315 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 OR52N2Q8NGI0 321 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 TBC1D15Q8TC07 691 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 PHKBQ93100 1093 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 MIEF2Q96C03 454 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 PGBD4Q96DM1 585 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 MYD88Q99836 296 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 ZNF287Q9HBT7 754 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.31□□□□□ -1.24
HERC4-213ENST00000506515 CFAP97Q9P2B7 532 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 CLCA2Q9UQC9 943 aa7.31□□□□□ -1.24
HERC4-213ENST00000506515 DRGXA6NNA5 263 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 MYO1FO00160 1098 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 KPNA5O15131 536 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 AGFG2O95081 481 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 KIF22Q14807 665 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 CNGA2Q16280 664 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 MORC1Q86VD1 984 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 PSMD1Q99460 953 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 COMMD10Q9Y6G5 202 aa7.3□□□□□ -1.24
HERC4-213ENST00000506515 ZNF785A8K8V0 405 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 ISM1B1AKI9 464 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 PRSS23O95084 383 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 GNAI2P04899 355 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 RARBP10826 455 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 ZKSCAN1P17029 563 aaPredicted RBP7.29□□□□□ -1.24
HERC4-213ENST00000506515 COMTP21964 271 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 MGAT1P26572 445 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 PRIM2P49643 509 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 ALDH5A1P51649 535 aaPredicted RBP7.29□□□□□ -1.24
HERC4-213ENST00000506515 CHN2P52757 468 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 FMO1Q01740 532 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 VPS72Q15906 364 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 KRTAP19-4Q3LI73 84 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 EMC10Q5UCC4 262 aa7.29□□□□□ -1.24
HERC4-213ENST00000506515 SPTY2D1Q68D10 685 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms