RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PHOX2BQ99453 314 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 MSTO1Q9BUK6 570 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 FAM13BQ9NYF5 915 aa17.63■□□□□ 0.41
COL1A1-205ENST00000476387 OGTO15294 1046 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 CXCL8P10145 99 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 SRFP11831 508 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 NPR3P17342 541 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 KRT85P78386 507 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 AMPD3Q01432 767 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 HTR4Q13639 388 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 ZC2HC1CQ53FD0 456 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-205ENST00000476387 AXDND1Q5T1B0 1012 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-205ENST00000476387 CWF19L1Q69YN2 538 aaKnown RBP17.62■□□□□ 0.41
COL1A1-205ENST00000476387 SLC8B1Q6J4K2 584 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 GRASPQ7Z6J2 395 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-205ENST00000476387 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 SIX5Q8N196 739 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 SLC7A14Q8TBB6 771 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 TBC1D7Q9P0N9 293 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 CDH7Q9ULB5 785 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 PCDHA7Q9UN72 937 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 ATP6V1DQ9Y5K8 247 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-205ENST00000476387 CDY1Q9Y6F8 540 aa17.62■□□□□ 0.41
COL1A1-205ENST00000476387 DOCK6Q96HP0 2047 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 SYN3O14994 580 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 NARSO43776 548 aaKnown RBP17.61■□□□□ 0.41
COL1A1-205ENST00000476387 GCNT3O95395 438 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 AOC1P19801 751 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 BRCC3P46736 316 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 E2F4Q16254 413 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 RSPO2Q6UXX9 243 aaPredicted RBP17.61■□□□□ 0.41
COL1A1-205ENST00000476387 ZNF720Q7Z2F6 126 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 FLCNQ8NFG4 579 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 ATOH1Q92858 354 aaPredicted RBP17.61■□□□□ 0.41
COL1A1-205ENST00000476387 RTP3Q9BQQ7 232 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 PYM1Q9BRP8 204 aaKnown RBP17.61■□□□□ 0.41
COL1A1-205ENST00000476387 HAPLN2Q9GZV7 340 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 RPF1Q9H9Y2 349 aaKnown RBP17.61■□□□□ 0.41
COL1A1-205ENST00000476387 PLEKHA5Q9HAU0 1116 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 MAGEF1Q9HAY2 307 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 OLFML3Q9NRN5 406 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 PANK4Q9NVE7 773 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 EXOC7Q9UPT5 735 aa17.61■□□□□ 0.41
COL1A1-205ENST00000476387 ZFHX2Q9C0A1 2572 aaPredicted RBP17.61■□□□□ 0.41
COL1A1-205ENST00000476387 A0A0B4J269 797 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 FRMD3A2A2Y4 597 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 I3L4J1 428 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 CCL16O15467 120 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 MEFVO15553 781 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-205ENST00000476387 TNFSF9P41273 254 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 ALCAMQ13740 583 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 VARS2Q5ST30 1063 aaKnown RBP17.6■□□□□ 0.41
COL1A1-205ENST00000476387 RESP18Q5W5W9 173 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 ADALQ6DHV7 355 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 SLC39A4Q6P5W5 647 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 ZNF461Q8TAF7 563 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 C18orf25Q96B23 403 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-205ENST00000476387 ACCSQ96QU6 501 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 SLC2A4RGQ9NR83 387 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 KBTBD4Q9NVX7 518 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 RCOR1Q9UKL0 485 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 KCNH3Q9ULD8 1083 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 NUB1Q9Y5A7 615 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
COL1A1-205ENST00000476387 H0Y858 1186 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 H7C4K7 107 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 POLR2DO15514 142 aaKnown RBP17.59■□□□□ 0.41
COL1A1-205ENST00000476387 XPOTO43592 962 aaKnown RBP17.59■□□□□ 0.41
COL1A1-205ENST00000476387 TBC1D4O60343 1298 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 PPP1R37O75864 691 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 CFHP08603 1231 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 ASIC1P78348 528 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 NTHL1P78549 312 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 MRPL58Q14197 206 aaKnown RBP17.59■□□□□ 0.41
COL1A1-205ENST00000476387 L1TD1Q5T7N2 865 aaKnown RBP17.59■□□□□ 0.41
COL1A1-205ENST00000476387 STXBP4Q6ZWJ1 553 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 MTSS1LQ765P7 747 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 POMGNT1Q8WZA1 660 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 FGF13Q92913 245 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 KIF12Q96FN5 646 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 SUSD3Q96L08 255 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 POLIQ9UNA4 740 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 ZDHHC9Q9Y397 364 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 NUMBLQ9Y6R0 609 aa17.59■□□□□ 0.41
COL1A1-205ENST00000476387 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 ARHGEF37A1IGU5 675 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 ANKRD63C9JTQ0 380 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 PROB1E7EW31 1015 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 FAM189A1O60320 539 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 ABLIM3O94929 683 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 ROR1Q01973 937 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 POSTNQ15063 836 aa17.58■□□□□ 0.4
COL1A1-205ENST00000476387 ENOX2Q16206 610 aaKnown RBP17.58■□□□□ 0.4
COL1A1-205ENST00000476387 PABPC1LQ4VXU2 614 aaKnown RBP17.58■□□□□ 0.4
COL1A1-205ENST00000476387 ZBTB41Q5SVQ8 909 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms