RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RHDQ02161 417 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 NOMO2Q5JPE7 1267 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 NOL8Q76FK4 1167 aaKnown RBP5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 TMPRSS6Q8IU80 811 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 IL17DQ8TAD2 202 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 EXTL1Q92935 676 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 PHACTR3Q96KR7 559 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 MRGPRX1Q96LB2 322 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 TEX101Q9BY14 249 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 BHMT2Q9H2M3 363 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 FAM204AQ9H8W3 233 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 PCDHA6Q9UN73 950 aa5.73□□□□□ -1.49
HMGB3P6-201ENST00000444896 CAPN8A6NHC0 703 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 AHRRA9YTQ3 701 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 AGFG2O95081 481 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 INSRRP14616 1297 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 GCSHP23434 173 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 PHKA1P46020 1223 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 PIK3CGP48736 1102 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 RNASE9P60153 205 aaKnown RBP5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 GPSM2P81274 684 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 SLFN5Q08AF3 891 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 CRHR2Q13324 411 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 CNGB1Q14028 1251 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 TOB2Q14106 344 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 HLTFQ14527 1009 aaKnown RBP eCLIP5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 KIF22Q14807 665 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 LCE1DQ5T752 114 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 RNF220Q5VTB9 566 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 AGAP9Q5VTM2 703 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 DBX2Q6ZNG2 339 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 ZNF365Q70YC5 407 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 TBC1D15Q8TC07 691 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 TNPO1Q92973 898 aaKnown RBP5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 SARGQ9BW04 601 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 PACSIN1Q9BY11 444 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 C22orf23Q9BZE7 217 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 VSX1Q9NZR4 365 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 CEP72Q9P209 647 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 TSC22D4Q9Y3Q8 395 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 CHST2Q9Y4C5 530 aa5.72□□□□□ -1.49
HMGB3P6-201ENST00000444896 CAND2O75155 1236 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 CKBP12277 381 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 TRIM27P14373 513 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 EXOSC9Q06265 439 aaKnown RBP5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 KHDC1LQ5JSQ8 128 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 SPDYAQ5MJ70 313 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 EMC10Q5UCC4 262 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 APOA5Q6Q788 366 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 CCDC149Q6ZUS6 474 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 RHOT2Q8IXI1 618 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 TMIEQ8NEW7 156 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 IL31RAQ8NI17 732 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 ANKS1AQ92625 1134 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 CCDC136Q96JN2 1154 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 KLHL32Q96NJ5 620 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZNF768Q9H5H4 540 aaKnown RBP5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 BRD9Q9H8M2 597 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 ARNT2Q9HBZ2 717 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 SLAMF7Q9NQ25 335 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 CPA4Q9UI42 421 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZDHHC8Q9ULC8 765 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 SORCS3Q9UPU3 1222 aa5.71□□□□□ -1.5
HMGB3P6-201ENST00000444896 E9PLN8 166 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 GJB1P08034 283 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 NPR1P16066 1061 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 FAM189BP81408 668 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 SLC25A3Q00325 362 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 SEMA5AQ13591 1074 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 PUM1Q14671 1186 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 KIAA0753Q2KHM9 967 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZXDCQ2QGD7 858 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 PDCD4Q53EL6 469 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 USP39Q53GS9 565 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 RABL3Q5HYI8 236 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 LRRC55Q6ZSA7 311 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 BRIX1Q8TDN6 353 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 SH3RF3Q8TEJ3 882 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 NUP133Q8WUM0 1156 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 MARS2Q96GW9 593 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 DCLRE1CQ96SD1 692 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 VKORC1Q9BQB6 163 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 TLR10Q9BXR5 811 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 ZNF703Q9H7S9 590 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 RSAD1Q9HA92 442 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 GPR35Q9HC97 309 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 SARS2Q9NP81 518 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 KLHL11Q9NVR0 708 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 RLIMQ9NVW2 624 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 EIF2B4Q9UI10 523 aaKnown RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 AGAP1Q9UPQ3 857 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 USP15Q9Y4E8 981 aaPredicted RBP5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 USP19O94966 1318 aa5.7□□□□□ -1.5
HMGB3P6-201ENST00000444896 CFAP69A5D8W1 941 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 APAF1O14727 1248 aa5.69□□□□□ -1.5
HMGB3P6-201ENST00000444896 TRIM24O15164 1050 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms