RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CTDNEP1O95476 244 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 NOTUMQ6P988 496 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 DLK2Q6UY11 383 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 DCUN1D1Q96GG9 259 aa10.26□□□□□ -0.77
SNX13-203ENST00000428135 PODXLO00592 558 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 LRG1P02750 347 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 KLHL29Q96CT2 875 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 PMS2P54278 862 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 MAGOHP61326 146 aaKnown RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 DPYDQ12882 1025 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 SGSM1Q2NKQ1 1148 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 OSMRQ99650 979 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 RFX7Q2KHR2 1363 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 A0A1B0GUA9 196 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 TMEM150BA6NC51 233 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 MIF4GDA9UHW6 222 aaKnown RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 F8W8V4 182 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 RTN2O75298 545 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 POMCP01189 267 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 GABPB1Q06547 395 aaPredicted RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 ATPAF2Q8N5M1 289 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 NT5C1AQ9BXI3 368 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 PITPNM3Q9BZ71 974 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 MTMR12Q9C0I1 747 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 RNF208Q9H0X6 261 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 ORC6Q9Y5N6 252 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 EEF2KO00418 725 aaKnown RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 SPTLC1O15269 473 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 MMEP08473 750 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 FDPSP14324 419 aaKnown RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 C6orf118Q5T5N4 469 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 TMED8Q6PL24 325 aaPredicted RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 SMAP1Q8IYB5 467 aaPredicted RBP10.25□□□□□ -0.77
SNX13-203ENST00000428135 CXorf38Q8TB03 319 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 TRAIPQ9BWF2 469 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 MAGEB5Q9BZ81 275 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 RNF14Q9UBS8 474 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 TUBE1Q9UJT0 475 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 USH1CQ9Y6N9 552 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 TTI1O43156 1089 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 APBA1Q02410 837 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 WHAMMQ8TF30 809 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 ARL8AQ96BM9 186 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 STARD7Q9NQZ5 370 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 BFARQ9NZS9 450 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 SUN2Q9UH99 717 aa10.25□□□□□ -0.77
SNX13-203ENST00000428135 MED24O75448 989 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 NT5C2P49902 561 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 SV2CQ496J9 727 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 ATG16L1Q676U5 607 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 FBXO38Q6PIJ6 1188 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 IPMKQ8NFU5 416 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 TMEM169Q96HH4 297 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 TRIM51Q9BSJ1 452 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 RTFDC1Q9BY42 306 aaPredicted RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 UCHL3P15374 230 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 KLRC1P26715 233 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 TYK2P29597 1187 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 GALCP54803 685 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 GRIK5Q16478 980 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 C11orf96Q7Z7L8 435 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 CHSY1Q86X52 802 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 CDKL3Q8IVW4 592 aaPredicted RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 SCG3Q8WXD2 468 aaKnown RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 KAZALD1Q96I82 304 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 RNPC3Q96LT9 517 aaKnown RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 ZDHHC15Q96MV8 337 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 ZBTB18Q99592 522 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 RAB6BQ9NRW1 208 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 DPP3Q9NY33 737 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 CPSF2Q9P2I0 782 aaKnown RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 TPX2Q9ULW0 747 aaKnown RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 ARHGAP23Q9P227 1491 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 SYTL3Q4VX76 610 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 ACOT1Q86TX2 421 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 CACUL1Q86Y37 369 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 FAM136AQ96C01 138 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 HAUS8Q9BT25 410 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 CYP4F11Q9HBI6 524 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 GGT7Q9UJ14 662 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 DCDC2CA8MYV0 355 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 KRT38O76015 456 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 CD4P01730 458 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 ADCY2Q08462 1091 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 GLE1Q53GS7 698 aaKnown RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 ITPRIPL1Q6GPH6 555 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 WDR48Q8TAF3 677 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 RFFLQ8WZ73 363 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.24□□□□□ -0.773e-6■■■■■ 30.2
SNX13-203ENST00000428135 CCSER1Q9C0I3 900 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 MAP3K7O43318 606 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 GGCXP38435 758 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 ORC2Q13416 577 aaPredicted RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 CUL1Q13616 776 aa10.24□□□□□ -0.77
SNX13-203ENST00000428135 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
SNX13-203ENST00000428135 NUDT18Q6ZVK8 323 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms