RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SRRTQ9BXP5 876 aaKnown RBP19.49■□□□□ 0.71
COMMD4-222ENST00000568034 ZNF576Q9H609 170 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 INTS13Q9NVM9 706 aa19.49■□□□□ 0.71
COMMD4-222ENST00000568034 PRG3Q9Y2Y8 225 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-222ENST00000568034 COL4A4P53420 1690 aaPredicted RBP19.49■□□□□ 0.71
COMMD4-222ENST00000568034 KIF4AO95239 1232 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 ITGB1P05556 798 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 CCDC192P0DO97 292 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 DLATP10515 647 aaKnown RBP19.48■□□□□ 0.71
COMMD4-222ENST00000568034 EPB41P11171 864 aaKnown RBP19.48■□□□□ 0.71
COMMD4-222ENST00000568034 CLCNKBP51801 687 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 ENPEPQ07075 957 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 BFSP1Q12934 665 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 ANO6Q4KMQ2 910 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 INTS8Q75QN2 995 aaKnown RBP19.48■□□□□ 0.71
COMMD4-222ENST00000568034 IRF2BP1Q8IU81 584 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 C1orf127Q8N9H9 656 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 C3orf58Q8NDZ4 430 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 BEST2Q8NFU1 509 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 ENOX1Q8TC92 643 aaKnown RBP19.48■□□□□ 0.71
COMMD4-222ENST00000568034 UROC1Q96N76 676 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 MTMR12Q9C0I1 747 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 AAASQ9NRG9 546 aa19.48■□□□□ 0.71
COMMD4-222ENST00000568034 SZT2Q5T011 3432 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 TMEM189-UBE2V1I3L0A0 370 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 PODXLO00592 558 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 PPEF2O14830 753 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 EFEMP2O95967 443 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 ALDH2P05091 517 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 RB1P06400 928 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 ALDH7A1P49419 539 aaKnown RBP19.47■□□□□ 0.71
COMMD4-222ENST00000568034 VAMP7P51809 220 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 TFAMQ00059 246 aaKnown RBP19.47■□□□□ 0.71
COMMD4-222ENST00000568034 KLHL23Q8NBE8 558 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 ARNTL2Q8WYA1 636 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 IGSF21Q96ID5 467 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 FNBP1Q96RU3 617 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 VN1R3Q9BXE9 311 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 SIX4Q9UIU6 781 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 FAN1Q9Y2M0 1017 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 PCDHB12Q9Y5F1 795 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-222ENST00000568034 PLXNA4Q9HCM2 1894 aa19.47■□□□□ 0.71
COMMD4-222ENST00000568034 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 XPOTO43592 962 aaKnown RBP19.46■□□□□ 0.71
COMMD4-222ENST00000568034 TRIM49P0CI25 452 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 TRIM49CP0CI26 452 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 RPL9P32969 192 aaKnown RBP19.46■□□□□ 0.71
COMMD4-222ENST00000568034 MARSP56192 900 aaKnown RBP19.46■□□□□ 0.71
COMMD4-222ENST00000568034 PLCB3Q01970 1234 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 NCAPHQ15003 741 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 C9orf57Q5W0N0 161 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 FRMD5Q7Z6J6 570 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 RNF168Q8IYW5 571 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-222ENST00000568034 FBXO22Q8NEZ5 403 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 DDX27Q96GQ7 796 aaKnown RBP19.46■□□□□ 0.71
COMMD4-222ENST00000568034 DPP3Q9NY33 737 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 SPG21Q9NZD8 308 aa19.46■□□□□ 0.71
COMMD4-222ENST00000568034 CARNS1A5YM72 827 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 H3BNC9 293 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 PIRO00625 290 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 LPXNO60711 386 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 FGF18O76093 207 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 C4BPAP04003 597 aaKnown RBP19.45■□□□□ 0.7
COMMD4-222ENST00000568034 TMEM191BP0C7N4 346 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 TNNI1P19237 187 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 PPM1AP35813 382 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 PPP3CAQ08209 521 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 DUOXA2Q1HG44 320 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 GPR153Q6NV75 609 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 C15orf39Q6ZRI6 1047 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 GDPD5Q8WTR4 605 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 ANKRD36BP1Q96IX9 119 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 BPIFA3Q9BQP9 254 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 NFE2L3Q9Y4A8 694 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 SCN1AP35498 2009 aa19.45■□□□□ 0.7
COMMD4-222ENST00000568034 MYO9BQ13459 2157 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 RFXAPO00287 272 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 TULP1O00294 542 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-222ENST00000568034 B3GAT3O94766 335 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 GNA14O95837 355 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 KRT13P13646 458 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 DNAJB1P25685 340 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 GRIN2CQ14957 1233 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 ZNF697Q5TEC3 545 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 TDRD10Q5VZ19 366 aaKnown RBP19.44■□□□□ 0.7
COMMD4-222ENST00000568034 DCLRE1AQ6PJP8 1040 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 TRAPPC11Q7Z392 1133 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 TRIM59Q8IWR1 403 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 SPPL3Q8TCT6 385 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 HASPINQ8TF76 798 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 CACTINQ8WUQ7 758 aaKnown RBP19.44■□□□□ 0.7
COMMD4-222ENST00000568034 SLC35C1Q96A29 364 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 CNOT6LQ96LI5 555 aaKnown RBP19.44■□□□□ 0.7
COMMD4-222ENST00000568034 C11orf84Q9BUA3 381 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-222ENST00000568034 COLEC11Q9BWP8 271 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 HSD3B7Q9H2F3 369 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 THAP9Q9H5L6 903 aa19.44■□□□□ 0.7
COMMD4-222ENST00000568034 METTL14Q9HCE5 456 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms