RNA–Protein interactions for RNA: ENST00000542428.1

AC009509.3-201, humanhuman

BASIC

Gene AC009509.3, Length 314 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.3-201ENST00000542428 CLP1Q92989 425 aaKnown RBP11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 BORCS6Q96GS4 357 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 MFSD14AQ96MC6 490 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 BPIFA3Q9BQP9 254 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 TMEM175Q9BSA9 504 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 SRRTQ9BXP5 876 aaKnown RBP11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 MMRN2Q9H8L6 949 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 MSRAQ9UJ68 235 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 DERAQ9Y315 318 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
AC009509.3-201ENST00000542428 NT5C1B-RDH14C9J2C7 533 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 PODXLO00592 558 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 XPOTO43592 962 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 ITGB3P05106 788 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 ITGB1P05556 798 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 KRT13P13646 458 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 LRPAP1P30533 357 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 OR1G1P47890 313 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 MARSP56192 900 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 ZNF445P59923 1031 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 TFAMQ00059 246 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SURF1Q15526 300 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 TPD52L1Q16890 204 aaPredicted RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 CDKAL1Q5VV42 579 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SPATA1Q5VX52 437 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SCARA3Q6AZY7 606 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 KCNT2Q6UVM3 1135 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 IRF2BP1Q8IU81 584 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 DHX40Q8IX18 779 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 BEST2Q8NFU1 509 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 ENOX1Q8TC92 643 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 FNBP1Q96RU3 617 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 THAP9Q9H5L6 903 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 CERS4Q9HA82 394 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SAMSN1Q9NSI8 373 aaKnown RBP11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 SLC38A7Q9NVC3 462 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
AC009509.3-201ENST00000542428 EPOPA6NHQ4 379 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 NRP1O14786 923 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 GALTP07902 379 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 TNNI1P19237 187 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 POLR2BP30876 1174 aaKnown RBP11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 ZNF165P49910 485 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 ERVK-21P61565 698 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 CLDN10P78369 228 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 PPP3CAQ08209 521 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 IQCB1Q15051 598 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 UPP1Q16831 310 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 CBWD6Q4V339 395 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 CBWD3Q5JTY5 395 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 CBWD5Q5RIA9 395 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 FILIP1Q7Z7B0 1213 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 CXorf38Q8TB03 319 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 SLC35C1Q96A29 364 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 UROC1Q96N76 676 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 TGS1Q96RS0 853 aaKnown RBP11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 VN1R3Q9BXE9 311 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 TTYH1Q9H313 450 aaPredicted RBP11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 ARMCX3Q9UH62 379 aaPredicted RBP11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 SIX4Q9UIU6 781 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 DENND4CQ5VZ89 1909 aa11.29□□□□□ -0.6
AC009509.3-201ENST00000542428 KCNJ18B7U540 433 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 C5orf67F2Z3F1 127 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 TMEM189-UBE2V1I3L0A0 370 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 IKBKBO14920 756 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 CSPG5O95196 566 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 FGFR1OPO95684 399 aaKnown RBP11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 TNNC2P02585 160 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 CYP3A5P20815 502 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 PPM1AP35813 382 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 PIK3CAP42336 1068 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 MXI1P50539 228 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 MYL7Q01449 175 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 ENPEPQ07075 957 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 BIRC3Q13489 604 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 KCNJ12Q14500 433 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 CD300LGQ6UXG3 332 aa11.28□□□□□ -0.6
AC009509.3-201ENST00000542428 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms