RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CASKIN2Q8WXE0 1202 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 HDAC11Q96DB2 347 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 BEGAINQ9BUH8 593 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 A0A0A6YYK5 440 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 HBP1O60381 514 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 ATP5HO75947 161 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 SGPL1O95470 568 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 ZFXP17010 805 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 ARPP19P56211 112 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 C1orf228Q6PIY5 440 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 SRLQ86TD4 932 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 FBXO41Q8TF61 875 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 TNIP3Q96KP6 325 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 LRRIQ3A6PVS8 624 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 CREB3O43889 395 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 SLITRK3O94933 977 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 IL18RAPO95256 599 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 RPSAP08865 295 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 FKBP1AP62942 108 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 MAPK7Q13164 816 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 MKL1Q969V6 931 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 SLC35C1Q96A29 364 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 KDM4FA0A1W2PPD8 638 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 MEFVO15553 781 aaPredicted RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 GTF2H1P32780 548 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 MEI1Q5TIA1 1274 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 GPAT2Q6NUI2 795 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 LRRC37BQ96QE4 947 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 AGO4Q9HCK5 861 aaKnown RBP16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 DONSONQ9NYP3 566 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 GAS2O43903 313 aaKnown RBP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 SH3BP5O60239 455 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 GH1P01241 217 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 WEE2P0C1S8 567 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 COILP38432 576 aaPredicted RBP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 MAP7Q14244 749 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 DBN1Q16643 649 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 EFHC2Q5JST6 749 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 FEZF2Q8TBJ5 459 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 ACTRT1Q8TDG2 376 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 TMC2Q8TDI7 906 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 ZNF473Q8WTR7 871 aaKnown RBP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 GRAMD1AQ96CP6 724 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 DBR1Q9UK59 544 aaKnown RBP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 INPP5FQ9Y2H2 1132 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 FNTAP49354 379 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 RARRES1P49788 294 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 CUL2Q13617 745 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 THEM5Q8N1Q8 247 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 ERAP1Q9NZ08 941 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 PPARGC1AQ9UBK2 798 aaKnown RBP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 GOLGA8CPA6NN73 597 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 ZC3H11AO75152 810 aaKnown RBP eCLIP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 CYP11B1P15538 503 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 HSD17B3P37058 310 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 MMP14P50281 582 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 IL17AQ16552 155 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 LONRF1Q17RB8 773 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 RAB44Q7Z6P3 723 aaPredicted RBP16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 OR6J1Q8NGC5 347 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 SPATA20Q8TB22 786 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 KCNQ5Q9NR82 932 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 RAB21Q9UL25 225 aa16.17■□□□□ 0.18
PCDHA3-202ENST00000532566 TYW5A2RUC4 315 aaKnown RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 IQCA1LA6NCM1 817 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 APOL1O14791 398 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 VIL1P09327 827 aaKnown RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 CHN1P15882 459 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 TCF7P36402 384 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 TAF1BQ53T94 588 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 GBP5Q96PP8 586 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 OSGEPQ9NPF4 335 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 PXMP2Q9NR77 195 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 CHUKO15111 745 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 SPAG7O75391 227 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 SUPT20HL2P0C7V6 817 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 COG7P83436 770 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 CDC42EP1Q00587 391 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 CENPCQ03188 943 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 EFCAB12Q6NXP0 572 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 SLC5A5Q92911 643 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 CYTH2Q99418 400 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 MRIQ9BWK5 157 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 BFARQ9NZS9 450 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 NEU2Q9Y3R4 380 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 NAMPTP43490 491 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 KYNUQ16719 465 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 CERS5Q8N5B7 392 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 TAS1R2Q8TE23 839 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 VPS39Q96JC1 886 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 TRABDQ9H4I3 376 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 H3BRJ5 948 aa16.16■□□□□ 0.18
PCDHA3-202ENST00000532566 EML1O00423 815 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms