RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PRRG2O14669 202 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 ZNF267Q14586 743 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-205ENST00000505998 CDSNQ15517 529 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 SPDYAQ5MJ70 313 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 ATAT1Q5SQI0 421 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 NAIF1Q69YI7 327 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-205ENST00000505998 ZNF529Q6P280 563 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 DRICH1Q6PGQ1 229 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-205ENST00000505998 HTR3DQ70Z44 454 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 FMNL3Q8IVF7 1028 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 GRAMD1CQ8IYS0 662 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 RGMAQ96B86 450 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 MYOCQ99972 504 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 C11orf54Q9H0W9 315 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-205ENST00000505998 SLC23A1Q9UHI7 598 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 POLHQ9Y253 713 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 CCDC18Q5T9S5 1454 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 XDHP47989 1333 aa7.27□□□□□ -1.25
NIPBL-205ENST00000505998 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 SLC16A6O15403 523 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 POMCP01189 267 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 LPOP22079 712 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 FXR1P51114 621 aaKnown RBP eCLIP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 TLE1Q04724 770 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 CSRP2Q16527 193 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 KHDC1Q4VXA5 237 aaKnown RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 USP39Q53GS9 565 aaKnown RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 NXNQ6DKJ4 435 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 EPM2AIP1Q7L775 607 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 TCEAL8Q8IYN2 117 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 MYO1HQ8N1T3 1032 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 TSR2Q969E8 191 aaKnown RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 DMRTA2Q96SC8 542 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 VRK1Q99986 396 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 NDC1Q9BTX1 674 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 SLC12A5Q9H2X9 1139 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 KMT5AQ9NQR1 393 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 EPRSP07814 1512 aaKnown RBP7.26□□□□□ -1.25
NIPBL-205ENST00000505998 NCANO14594 1321 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 PNPLA7Q6ZV29 1317 aa7.26□□□□□ -1.25
NIPBL-205ENST00000505998 TIAM1Q13009 1591 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 KIF13AQ9H1H9 1805 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 KIAA0391O15091 583 aaKnown RBP7.25□□□□□ -1.25
NIPBL-205ENST00000505998 PRPF3O43395 683 aaKnown RBP7.25□□□□□ -1.25
NIPBL-205ENST00000505998 FTLP02792 175 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-205ENST00000505998 AMHP03971 560 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 ADRB1P08588 477 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 ZNF280AP59817 542 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-205ENST00000505998 MLC1Q15049 377 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 UBE3BQ7Z3V4 1068 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 C1orf210Q8IVY1 113 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 MAGEB6Q8N7X4 407 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 EXTL1Q92935 676 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 C1GALT1C1Q96EU7 318 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 PHACTR3Q96KR7 559 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 GPR20Q99678 358 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 ANLNQ9NQW6 1124 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 EIF2B4Q9UI10 523 aaKnown RBP7.25□□□□□ -1.25
NIPBL-205ENST00000505998 GLI2P10070 1586 aa7.25□□□□□ -1.25
NIPBL-205ENST00000505998 TCRBV7S2A1N4TA0A589 114 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 LRRC14BA6NHZ5 514 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 ARIH2O95376 493 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 PARNO95453 639 aaKnown RBP7.24□□□□□ -1.25
NIPBL-205ENST00000505998 MTHFD1P11586 935 aaKnown RBP7.24□□□□□ -1.25
NIPBL-205ENST00000505998 ALAS1P13196 640 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 MALP21145 153 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 SMARCA1P28370 1054 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 UBXN2BQ14CS0 331 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 NRN1LQ496H8 165 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 MINDY4Q4G0A6 757 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 CCDC157Q569K6 752 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 DACT2Q5SW24 774 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 TMPRSS6Q8IU80 811 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 WDR75Q8IWA0 830 aaKnown RBP7.24□□□□□ -1.25
NIPBL-205ENST00000505998 CAMKK1Q8N5S9 505 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 DCBLD1Q8N8Z6 715 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 SLC35G2Q8TBE7 412 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 DIS3LQ8TF46 1054 aaKnown RBP7.24□□□□□ -1.25
NIPBL-205ENST00000505998 PCDHA3Q9Y5H8 950 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 ATP10BO94823 1461 aa7.24□□□□□ -1.25
NIPBL-205ENST00000505998 MAGI3Q5TCQ9 1506 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 GOLGA6CA6NDK9 693 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 GOLGA6BA6NDN3 693 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 DRGXA6NNA5 263 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 GRM6O15303 877 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 CD1AP06126 327 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 GOLGA6DP0CG33 693 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 MAP2K6P52564 334 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 NHLH2Q02577 135 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 NOGQ13253 232 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 PABPC1LQ4VXU2 614 aaKnown RBP7.23□□□□□ -1.25
NIPBL-205ENST00000505998 MED25Q71SY5 747 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 SYT12Q8IV01 421 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 NLGN4YQ8NFZ3 816 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-205ENST00000505998 FAM193BQ96PV7 902 aaPredicted RBP7.23□□□□□ -1.25
NIPBL-205ENST00000505998 GOLGA6AQ9NYA3 693 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 CHPF2Q9P2E5 772 aa7.23□□□□□ -1.25
NIPBL-205ENST00000505998 SORCS3Q9UPU3 1222 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms