RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 OLFM3Q96PB7 478 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 ECSITQ9BQ95 431 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 NUP85Q9BW27 656 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 TAS2R1Q9NYW7 299 aa13.86□□□□□ -0.19
GAPVD1-220ENST00000497580 MROH7Q68CQ1 1323 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 TMCC1O94876 653 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 FGRP09769 529 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ITIH2P19823 946 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 PICALMQ13492 652 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 MAPK6Q16659 721 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 SLC45A4Q5BKX6 768 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 LENG1Q96BZ8 264 aaPredicted RBP13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 AGPAT1Q99943 283 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 REEP2Q9BRK0 252 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 RUSC1Q9BVN2 902 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 UBE2TQ9NPD8 197 aaPredicted RBP13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 CASZ1Q86V15 1759 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 USP17L5A8MUK1 530 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 GOLGA8SH3BPF8 625 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 GOLGA8MH3BSY2 632 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 GPC5P78333 572 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 PDK4Q16654 411 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ZNF564Q8TBZ8 553 aaPredicted RBP13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 STK33Q9BYT3 514 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 SMYD3Q9H7B4 428 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 RMI1Q9H9A7 625 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 PCDHA2Q9Y5H9 948 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 CCDC88AQ3V6T2 1871 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ARHGAP42A6NI28 874 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ANPEPP15144 967 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 KRT4P19013 534 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 MAGEA4P43358 317 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 COG2Q14746 738 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 CBWD6Q4V339 395 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 CBWD3Q5JTY5 395 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 CBWD5Q5RIA9 395 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 SH2D4BQ5SQS7 431 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 TRABD2AQ86V40 505 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 TRIM55Q9BYV6 548 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 INTS2Q9H0H0 1204 aaKnown RBP13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 ZNF212Q9UDV6 495 aa13.85□□□□□ -0.19
GAPVD1-220ENST00000497580 SCN11AQ9UI33 1791 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 MED24O75448 989 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 ALAS1P13196 640 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 CDC16Q13042 620 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 STAT4Q14765 748 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 ELMO3Q96BJ8 720 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 YIPF2Q9BWQ6 316 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 TYW1Q9NV66 732 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 WHRNQ9P202 907 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 NENFQ9UMX5 172 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 TDRKHQ9Y2W6 561 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 ATP6V1B1P15313 513 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 RGS9BPQ6ZS82 235 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 HAS1Q92839 578 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 IWS1Q96ST2 819 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 ASLP04424 464 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 NR1H3Q13133 447 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 FASTKD3Q14CZ7 662 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 C7orf43Q8WVR3 580 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 PYDC1Q8WXC3 89 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 TTC17Q96AE7 1141 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 CCDC124Q96CT7 223 aaKnown RBP13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
GAPVD1-220ENST00000497580 KIF1AQ12756 1690 aa13.83□□□□□ -0.19
GAPVD1-220ENST00000497580 SPDYE16A6NNV3 312 aaPredicted RBP13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 C2CD2LO14523 706 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 OATP04181 439 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 GYS1P13807 737 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 NMT1P30419 496 aaKnown RBP13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 MYL7Q01449 175 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 MED21Q13503 144 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 C2CD6Q53TS8 623 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 ARSHQ5FYA8 562 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 LPCAT4Q643R3 524 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 RIPOR1Q6ZS17 1223 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 RAPH1Q70E73 1250 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 TXNRD3Q86VQ6 643 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 ANKMY2Q8IV38 441 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 FBXO27Q8NI29 283 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 TMEM120AQ9BXJ8 343 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 MIS12Q9H081 205 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 PPM1HQ9ULR3 514 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 R3HDM2Q9Y2K5 976 aaKnown RBP13.83□□□□□ -0.2
GAPVD1-220ENST00000497580 BANF1O75531 89 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms