RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ITGB1P05556 798 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 GNAI3P08754 354 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 SBK3P0C264 359 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 ZNF20P17024 532 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 ACRV1P26436 265 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 HTR1BP28222 390 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 CHN2P52757 468 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 GNAI1P63096 354 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 ADAM17P78536 824 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 FLYWCH1Q4VC44 716 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 C1QL3Q5VWW1 255 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 MED25Q71SY5 747 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 SLC35A4Q96G79 324 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM167AQ96KS9 214 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 NDC1Q9BTX1 674 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 REXO4Q9GZR2 422 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 GSTO2Q9H4Y5 243 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 WDCPQ9H6R7 721 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM204AQ9H8W3 233 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 SLAMF7Q9NQ25 335 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 FBXO34Q9NWN3 711 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 OBP2AQ9NY56 170 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 SORCS3Q9UPU3 1222 aa4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 FRMPD2Q68DX3 1309 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-217ENST00000488087 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 CDHR4A6H8M9 788 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 DRGXA6NNA5 263 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 F2RL2O00254 374 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 B3GALT2O43825 422 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 RECQL4O94761 1208 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 SCAF4O95104 1147 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 FTH1P19P0C7X4 201 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 TYRP14679 529 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 SLC6A2P23975 617 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 PIK3CGP48736 1102 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 NHLH2Q02577 135 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 EFEMP1Q12805 493 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 R3HDM1Q15032 1099 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 CSRP2Q16527 193 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 NRN1LQ496H8 165 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 USP39Q53GS9 565 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 SPDYAQ5MJ70 313 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 NAIF1Q69YI7 327 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 OVCH2Q7RTZ1 564 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 C1orf210Q8IVY1 113 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 FITM2Q8N6M3 262 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 AOPEPQ8N6M6 819 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 TBC1D15Q8TC07 691 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 PNPOQ9NVS9 261 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 AURKAIP1Q9NWT8 199 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 GABBR1Q9UBS5 961 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 STAP2Q9UGK3 403 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 DDX20Q9UHI6 824 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 PCDHA1Q9Y5I3 950 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 XDHP47989 1333 aa4.89□□□□□ -1.63
ECHDC1-217ENST00000488087 NT5C1B-RDH14C9J2C7 533 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 LEFTY2O00292 366 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 KIF3BO15066 747 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 PRDX5P30044 214 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 RNASE9P60153 205 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 FGL2Q14314 439 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 GRM3Q14832 879 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 LLGL1Q15334 1064 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 CCDC93Q567U6 631 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 HTR3DQ70Z44 454 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 SYT12Q8IV01 421 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 IL17RDQ8NFM7 739 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 CPT1CQ8TCG5 803 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 BRIX1Q8TDN6 353 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 EXTL1Q92935 676 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 TNPO1Q92973 898 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 C1orf43Q9BWL3 253 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 B3GNT5Q9BYG0 378 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 SARS2Q9NP81 518 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 PARPBPQ9NWS1 579 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 SIDT1Q9NXL6 827 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 TRPM5Q9NZQ8 1165 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM30AQ9NZY2 134 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 TSC22D4Q9Y3Q8 395 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 USP15Q9Y4E8 981 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 TESMINQ9Y4I5 508 aa4.88□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM227AF5H4B4 570 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 FAM20BO75063 409 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 TUSC2O75896 110 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 AGFG2O95081 481 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 SPATA31D3P0C874 917 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 SLC6A4P31645 630 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 PHKA1P46020 1223 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 PSMC1P62191 440 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 RAB1AP62820 205 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 NKX6-1P78426 367 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 HLTFQ14527 1009 aaKnown RBP eCLIP4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 GBX1Q14549 363 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 PLS1Q14651 629 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 ANO6Q4KMQ2 910 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 RABL3Q5HYI8 236 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 KHDC1LQ5JSQ8 128 aa4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 UTP14CQ5TAP6 766 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-217ENST00000488087 TSHZ3Q63HK5 1081 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms