RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SGSM1Q2NKQ1 1148 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 SLC30A5Q8TAD4 765 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 ARID3AQ99856 593 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 SYT11Q9BT88 431 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 EIF2AQ9BY44 585 aaKnown RBP20.39■□□□□ 0.86
SMC4-209ENST00000468653 TRIM17Q9Y577 477 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 NUB1Q9Y5A7 615 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 TRPV2Q9Y5S1 764 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 CDY2AQ9Y6F7 541 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 CTAGE9A4FU28 777 aa20.39■□□□□ 0.85
SMC4-209ENST00000468653 ASS1P00966 412 aaKnown RBP20.39■□□□□ 0.85
SMC4-209ENST00000468653 RPLP2P05387 115 aaKnown RBP20.39■□□□□ 0.85
SMC4-209ENST00000468653 ACLYP53396 1101 aa20.39■□□□□ 0.85
SMC4-209ENST00000468653 CD302Q8IX05 232 aa20.39■□□□□ 0.85
SMC4-209ENST00000468653 SLC20A1Q8WUM9 679 aa20.39■□□□□ 0.85
SMC4-209ENST00000468653 BEGAINQ9BUH8 593 aa20.39■□□□□ 0.85
SMC4-209ENST00000468653 TSKSQ9UJT2 592 aa20.39■□□□□ 0.85
SMC4-209ENST00000468653 MEFVO15553 781 aaPredicted RBP20.38■□□□□ 0.85
SMC4-209ENST00000468653 KRT19P08727 400 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 ITGA7Q13683 1181 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 TMEM132DQ14C87 1099 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 PTGISQ16647 500 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 SCARA3Q6AZY7 606 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 SLC47A2Q86VL8 602 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 RPUSD2Q8IZ73 545 aaKnown RBP20.38■□□□□ 0.85
SMC4-209ENST00000468653 EPS8L1Q8TE68 723 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 PACSIN1Q9BY11 444 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 NENFQ9UMX5 172 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 PTCH2Q9Y6C5 1203 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 GRIN2DO15399 1336 aa20.38■□□□□ 0.85
SMC4-209ENST00000468653 PDE6CP51160 858 aa20.37■□□□□ 0.85
SMC4-209ENST00000468653 TERF1P54274 439 aa20.37■□□□□ 0.85
SMC4-209ENST00000468653 YARSP54577 528 aaKnown RBP20.37■□□□□ 0.85
SMC4-209ENST00000468653 ZNF699Q32M78 642 aa20.37■□□□□ 0.85
SMC4-209ENST00000468653 NAPGQ99747 312 aaPredicted RBP20.37■□□□□ 0.85
SMC4-209ENST00000468653 SNTG2Q9NY99 539 aa20.37■□□□□ 0.85
SMC4-209ENST00000468653 MOXD2PA6NHM9 499 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 TACC1O75410 805 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 CTSHP09668 335 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 H2AFZP0C0S5 128 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 CYP11B1P15538 503 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 NAP1L1P55209 391 aaKnown RBP20.36■□□□□ 0.85
SMC4-209ENST00000468653 TAF3Q5VWG9 929 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 H2AFVQ71UI9 128 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 NOP9Q86U38 636 aaKnown RBP20.36■□□□□ 0.85
SMC4-209ENST00000468653 OLIG1Q8TAK6 271 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 WNT8BQ93098 351 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 GLT1D1Q96MS3 346 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 PLEKHA5Q9HAU0 1116 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 NOCTQ9UK39 431 aaKnown RBP20.36■□□□□ 0.85
SMC4-209ENST00000468653 NOD1Q9Y239 953 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 NOC2LQ9Y3T9 749 aaKnown RBP20.36■□□□□ 0.85
SMC4-209ENST00000468653 PCDHB4Q9Y5E5 795 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 UMODL1Q5DID0 1318 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 ANK1P16157 1881 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 TMCO5BA8MYB1 307 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 MOCS3O95396 460 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 BPIFB4P59827 614 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 LHX8Q68G74 356 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 RPAINQ86UA6 219 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 FAM228AQ86W67 206 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 NT5DC4Q86YG4 428 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 RNF10Q8N5U6 811 aaKnown RBP20.36■□□□□ 0.85
SMC4-209ENST00000468653 C1orf127Q8N9H9 656 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 MYRIPQ8NFW9 859 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 TRIM58Q8NG06 486 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 KIF12Q96FN5 646 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 NOX5Q96PH1 765 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 TSEN34Q9BSV6 310 aaKnown RBP20.36■□□□□ 0.85
SMC4-209ENST00000468653 NIF3L1Q9GZT8 377 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 ACP6Q9NPH0 428 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 INTUQ9ULD6 942 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 C2CD2Q9Y426 696 aa20.36■□□□□ 0.85
SMC4-209ENST00000468653 ITGB3P05106 788 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 THPOP40225 353 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 DNAAF5Q86Y56 855 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 TAF4BQ92750 862 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 ALS2CR12Q96Q35 445 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 APOL6Q9BWW8 343 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 HES2Q9Y543 173 aa20.35■□□□□ 0.85
SMC4-209ENST00000468653 RPS6KA5O75582 802 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 CHRNA1P02708 482 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 ACO1P21399 889 aaKnown RBP20.34■□□□□ 0.85
SMC4-209ENST00000468653 PTPN11Q06124 597 aaPredicted RBP20.34■□□□□ 0.85
SMC4-209ENST00000468653 TMEM270Q6UE05 265 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 SNX27Q96L92 541 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
SMC4-209ENST00000468653 XYLT2Q9H1B5 865 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 NXF3Q9H4D5 531 aaKnown RBP20.34■□□□□ 0.85
SMC4-209ENST00000468653 L2HGDHQ9H9P8 463 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 SIX4Q9UIU6 781 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 SALL4Q9UJQ4 1053 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 ATP8B3O60423 1300 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 BTNL10A8MVZ5 291 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 BUB1O43683 1085 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 MMEP08473 750 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 CHRNB2P17787 502 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 CDR2Q01850 454 aa20.34■□□□□ 0.85
SMC4-209ENST00000468653 TWF2Q6IBS0 349 aaKnown RBP20.34■□□□□ 0.85
SMC4-209ENST00000468653 ARRDC4Q8NCT1 418 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms