RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 TUSC2O75896 110 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 HAUS5O94927 633 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 GNAI3P08754 354 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 FTH1P19P0C7X4 201 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 TYRP14679 529 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 SLC6A2P23975 617 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 ACRV1P26436 265 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 GNAI1P63096 354 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 NHLH2Q02577 135 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 GBX1Q14549 363 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 PLS1Q14651 629 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 CCAR1Q8IX12 1150 aaKnown RBP5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 FITM2Q8N6M3 262 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 AOPEPQ8N6M6 819 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 IL17RDQ8NFM7 739 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 TNPO1Q92973 898 aaKnown RBP5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 TIFAQ96CG3 184 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 LRFN3Q9BTN0 628 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 B3GNT5Q9BYG0 378 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 REXO4Q9GZR2 422 aaKnown RBP5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 GEMIN8Q9NWZ8 242 aaKnown RBP5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 STAP2Q9UGK3 403 aa5.58□□□□□ -1.52
SNORA40.2-201ENST00000390847 NT5C1B-RDH14C9J2C7 533 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 LEFTY2O00292 366 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 ZNF20P17024 532 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 PRDX5P30044 214 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 PHKA1P46020 1223 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 PIK3CGP48736 1102 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 RAB1AP62820 205 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 FGL2Q14314 439 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 SPATS1Q496A3 300 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 ANO6Q4KMQ2 910 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 CCDC93Q567U6 631 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 NAIF1Q69YI7 327 aaPredicted RBP5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 NPNTQ6UXI9 565 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 CCDC149Q6ZUS6 474 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 SYT12Q8IV01 421 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 PLBD2Q8NHP8 589 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 BRIX1Q8TDN6 353 aaKnown RBP5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 C1orf43Q9BWL3 253 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 TMEM60Q9H2L4 133 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 BRD9Q9H8M2 597 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 SARS2Q9NP81 518 aaKnown RBP5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 CNNM1Q9NRU3 951 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 CPA4Q9UI42 421 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
SNORA40.2-201ENST00000390847 XDHP47989 1333 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 CAPN8A6NHC0 703 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 SLC43A1O75387 559 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 RECQL4O94761 1208 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 SCAF4O95104 1147 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 SLC6A4P31645 630 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 GNALP38405 381 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 RNASE9P60153 205 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 NKX6-1P78426 367 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 EFEMP1Q12805 493 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 R3HDM1Q15032 1099 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 NRN1LQ496H8 165 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 USP39Q53GS9 565 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 SPDYAQ5MJ70 313 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 UTP14CQ5TAP6 766 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 HTR3DQ70Z44 454 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 SRGAP1Q7Z6B7 1085 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 PRRT2Q7Z6L0 340 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 CPT1CQ8TCG5 803 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 MRPL46Q9H2W6 279 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 AURKAIP1Q9NWT8 199 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 SIDT1Q9NXL6 827 aaKnown RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 TRPM5Q9NZQ8 1165 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 JKAMPQ9P055 326 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 PCDHA6Q9UN73 950 aa5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 USP15Q9Y4E8 981 aaPredicted RBP5.56□□□□□ -1.52
SNORA40.2-201ENST00000390847 A0A088AWK7 358 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 A0A1W2PPL8 197 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 CFAP69A5D8W1 941 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 A6NNZ2 444 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 FAM20BO75063 409 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 AGFG2O95081 481 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 AHSGP02765 367 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 KRT18P05783 430 aaKnown RBP5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 GJB1P08034 283 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 AGFG1P52594 562 aaKnown RBP5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 TBX4P57082 545 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 PSMC1P62191 440 aaKnown RBP5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 NOMO3P69849 1222 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 ADAM17P78536 824 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 KHDC1LQ5JSQ8 128 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 TSHZ3Q63HK5 1081 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 KSR2Q6VAB6 950 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 ZNF365Q70YC5 407 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 PPP1R3BQ86XI6 285 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 FAM90A1Q86YD7 464 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 C1orf210Q8IVY1 113 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 FAM156AQ8NDB6 213 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 EXTL1Q92935 676 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 NT5C1BQ96P26 610 aa5.55□□□□□ -1.52
SNORA40.2-201ENST00000390847 DCLRE1CQ96SD1 692 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms