RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 KPNA5O15131 536 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 HOXA3O43365 443 aaPredicted RBP6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 NOBOXO60393 691 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 CNOT4O95628 575 aaKnown RBP6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 AHSGP02765 367 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 NPR1P16066 1061 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 GNAT2P19087 354 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 RPS19P39019 145 aaKnown RBP6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 PIK3CBP42338 1070 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 PRIM2P49643 509 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 SOX8P57073 446 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 CLRN1P58418 232 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 PPP2CBP62714 309 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 PPP2CAP67775 309 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 HABP2Q14520 560 aaPredicted RBP6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 ZRSR2Q15696 482 aaKnown RBP6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 GRAMD1BQ3KR37 738 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 CCDC93Q567U6 631 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 ATRNL1Q5VV63 1379 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 MFSD5Q6N075 450 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 FAM111BQ6SJ93 734 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 ZNF783Q6ZMS7 281 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 FAM90A1Q86YD7 464 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 DCBLD1Q8N8Z6 715 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 IL17RDQ8NFM7 739 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 OR6B3Q8NGW1 331 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 KBTBD7Q8WVZ9 684 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 RIPOR3Q96MK2 946 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 TOX2Q96NM4 488 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 UNKQ9C0B0 810 aaKnown RBP6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 ARFGAP3Q9NP61 516 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 CLCA2Q9UQC9 943 aa6.63□□□□□ -1.35
RNU6-40P-201ENST00000384254 TCRBV7S2A1N4TA0A589 114 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 MYO1FO00160 1098 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 POMCP01189 267 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 AMHP03971 560 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 SERPINB3P29508 390 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 NOMO3P69849 1222 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 MXRA7P84157 204 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 STK3Q13188 491 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 FKBP15Q5T1M5 1219 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 EMC10Q5UCC4 262 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 XRRA1Q6P2D8 792 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 TSHZ1Q6ZSZ6 1077 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 FAM83AQ86UY5 434 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 MYLK4Q86YV6 388 aaPredicted RBP6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 CCDC33Q8N5R6 958 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 ZFP28Q8NHY6 868 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 DEPTORQ8TB45 409 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 ZNF512Q96ME7 567 aaPredicted RBP6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 STARD7Q9NQZ5 370 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 RLIMQ9NVW2 624 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 AFF4Q9UHB7 1163 aaKnown RBP6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 PADI4Q9UM07 663 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 PAXBP1Q9Y5B6 917 aa6.62□□□□□ -1.35
RNU6-40P-201ENST00000384254 USP19O94966 1318 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 TBC1D4O60343 1298 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 HAUS5O94927 633 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 FOSP01100 380 aaPredicted RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 EN2P19622 333 aaPredicted RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 SUMO3P55854 103 aaPredicted RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 EXOSC9Q06265 439 aaKnown RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 CHAF1AQ13111 956 aaPredicted RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 FAM214AQ32MH5 1076 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 UBE3BQ7Z3V4 1068 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 OR2C3Q8N628 320 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 PCSK9Q8NBP7 692 aaKnown RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 GIMAP8Q8ND71 665 aaPredicted RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 TFAP2CQ92754 450 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 BORCS6Q96GS4 357 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 TMEM176AQ96HP8 235 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 SGCZQ96LD1 299 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 MYOCQ99972 504 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 CPPED1Q9BRF8 314 aaPredicted RBP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 CERS4Q9HA82 394 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 SACM1LQ9NTJ5 587 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 JKAMPQ9P055 326 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 SRRDQ9UH36 339 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 SLC23A1Q9UHI7 598 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 LRCH1Q9Y2L9 728 aa6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.61□□□□□ -1.35
RNU6-40P-201ENST00000384254 POM121BA6NF01 834 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 MATN2O00339 956 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 TBX3O15119 743 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 LAMTOR5O43504 91 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 SLC43A1O75387 559 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 IPO13O94829 963 aaKnown RBP6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 IL18RAPO95256 599 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 ANXA1P04083 346 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 GJB1P08034 283 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 PARP1P09874 1014 aaKnown RBP6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 RARBP10826 455 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 TNFSF4P23510 183 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 PHKA1P46020 1223 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 STT3AP46977 705 aa6.6□□□□□ -1.35
RNU6-40P-201ENST00000384254 CASP5P51878 434 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms