RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 INTS13Q9NVM9 706 aa28.84■■■□□ 2.21
STUB1-201ENST00000219548 XPOTO43592 962 aaKnown RBP28.83■■■□□ 2.21
STUB1-201ENST00000219548 TMEM191BP0C7N4 346 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 BMPR1AP36894 532 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 ERVK-21P61565 698 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 EPC2Q52LR7 807 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 NT5DC4Q86YG4 428 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 ENOX1Q8TC92 643 aaKnown RBP28.83■■■□□ 2.21
STUB1-201ENST00000219548 TMC2Q8TDI7 906 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 AAASQ9NRG9 546 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 DPP3Q9NY33 737 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 FAN1Q9Y2M0 1017 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 PCDHB12Q9Y5F1 795 aa28.83■■■□□ 2.21
STUB1-201ENST00000219548 COL4A4P53420 1690 aaPredicted RBP28.83■■■□□ 2.21
STUB1-201ENST00000219548 FGFR1OPO95684 399 aaKnown RBP28.82■■■□□ 2.2
STUB1-201ENST00000219548 ALDH2P05091 517 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 CYP3A5P20815 502 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 IGFBP6P24592 240 aaPredicted RBP28.82■■■□□ 2.2
STUB1-201ENST00000219548 HSP90AA4PQ58FG1 418 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 C1orf220Q5T0J3 134 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 BCL7CQ8WUZ0 217 aaPredicted RBP28.82■■■□□ 2.2
STUB1-201ENST00000219548 ZNF516Q92618 1163 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 NAT10Q9H0A0 1025 aaKnown RBP28.82■■■□□ 2.2
STUB1-201ENST00000219548 MARCH5Q9NX47 278 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 ARMCX3Q9UH62 379 aaPredicted RBP28.82■■■□□ 2.2
STUB1-201ENST00000219548 RWDD3Q9Y3V2 267 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 NFE2L3Q9Y4A8 694 aa28.82■■■□□ 2.2
STUB1-201ENST00000219548 UPP1Q16831 310 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 SCARA3Q6AZY7 606 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 IRF2BP1Q8IU81 584 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 AOPEPQ8N6M6 819 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 HASPINQ8TF76 798 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 CACTINQ8WUQ7 758 aaKnown RBP28.81■■■□□ 2.2
STUB1-201ENST00000219548 ARNTL2Q8WYA1 636 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 ANKRD36BP1Q96IX9 119 aa28.81■■■□□ 2.2
STUB1-201ENST00000219548 CNOT6LQ96LI5 555 aaKnown RBP28.81■■■□□ 2.2
STUB1-201ENST00000219548 SAMSN1Q9NSI8 373 aaKnown RBP28.81■■■□□ 2.2
STUB1-201ENST00000219548 PODXLO00592 558 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 PPEF2O14830 753 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 MYL5Q02045 173 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 DUOXA2Q1HG44 320 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 DCAF17Q5H9S7 520 aaPredicted RBP28.8■■■□□ 2.2
STUB1-201ENST00000219548 FRMD5Q7Z6J6 570 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 SLC39A11Q8N1S5 342 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 C1orf127Q8N9H9 656 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 KLHL23Q8NBE8 558 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 C3orf58Q8NDZ4 430 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 UROC1Q96N76 676 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 SAMD11Q96NU1 681 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 THAP9Q9H5L6 903 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 ZNF576Q9H609 170 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 MMRN2Q9H8L6 949 aa28.8■■■□□ 2.2
STUB1-201ENST00000219548 MYO7AQ13402 2215 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 KIF4AO95239 1232 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 TNNC2P02585 160 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 ITGB1P05556 798 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 LRPAP1P30533 357 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 ZNF165P49910 485 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 CLDN10P78369 228 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 TCERG1LQ5VWI1 586 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 CREBRFQ8IUR6 639 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 TTYH1Q9H313 450 aaPredicted RBP28.79■■■□□ 2.2
STUB1-201ENST00000219548 SPG21Q9NZD8 308 aa28.79■■■□□ 2.2
STUB1-201ENST00000219548 EPOPA6NHQ4 379 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 GNA14O95837 355 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 ITGB3P05106 788 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 C9orf57Q5W0N0 161 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 USP37Q86T82 979 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 FBXO22Q8NEZ5 403 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 IGSF21Q96ID5 467 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 BPIFA3Q9BQP9 254 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 METTL14Q9HCE5 456 aaKnown RBP28.78■■■□□ 2.2
STUB1-201ENST00000219548 C5orf67F2Z3F1 127 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 FGF18O76093 207 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 B3GAT3O94766 335 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 POLR2BP30876 1174 aaKnown RBP28.78■■■□□ 2.2
STUB1-201ENST00000219548 RPL9P32969 192 aaKnown RBP28.78■■■□□ 2.2
STUB1-201ENST00000219548 PPM1AP35813 382 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 MARSP56192 900 aaKnown RBP28.78■■■□□ 2.2
STUB1-201ENST00000219548 PPP3CAQ08209 521 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 NCAPHQ15003 741 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 LRSAM1Q6UWE0 723 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 TRAPPC11Q7Z392 1133 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 DDX27Q96GQ7 796 aaKnown RBP28.78■■■□□ 2.2
STUB1-201ENST00000219548 COLEC11Q9BWP8 271 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 PLVAPQ9BX97 442 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.78■■■□□ 2.2
STUB1-201ENST00000219548 VWA8A3KMH1 1905 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 ATG2AQ2TAZ0 1938 aa28.78■■■□□ 2.2
STUB1-201ENST00000219548 GCLMP48507 274 aa28.77■■■□□ 2.2
STUB1-201ENST00000219548 TDRD10Q5VZ19 366 aaKnown RBP28.77■■■□□ 2.2
STUB1-201ENST00000219548 DHX40Q8IX18 779 aaKnown RBP28.77■■■□□ 2.2
STUB1-201ENST00000219548 CXorf38Q8TB03 319 aa28.77■■■□□ 2.2
STUB1-201ENST00000219548 TMEM169Q96HH4 297 aa28.77■■■□□ 2.2
STUB1-201ENST00000219548 ALG13Q9NP73 1137 aaKnown RBP28.77■■■□□ 2.2
STUB1-201ENST00000219548 FANCLQ9NW38 375 aa28.77■■■□□ 2.2
STUB1-201ENST00000219548 SIX4Q9UIU6 781 aa28.77■■■□□ 2.2
STUB1-201ENST00000219548 ITGA11Q9UKX5 1188 aa28.77■■■□□ 2.2
STUB1-201ENST00000219548 ANO9A1A5B4 782 aa28.76■■■□□ 2.19
STUB1-201ENST00000219548 IKBKBO14920 756 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms