RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 PSMD10O75832 226 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 NPTXRO95502 500 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 LRG1P02750 347 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 AXLP30530 894 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 TUSC3Q13454 348 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 BMP2KLQ5H9B9 411 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 PRSS36Q5K4E3 855 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 PDXDC1Q6P996 788 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 C19orf48Q6RUI8 117 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 RDM1Q8NG50 284 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 SMARCD2Q92925 531 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 AVENQ9NQS1 362 aaPredicted RBP13.25□□□□□ -0.29
CHD2-218ENST00000629346 COL4A2P08572 1712 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 PRRG1O14668 218 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 ZBTB43O43298 467 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 GJA1P17302 382 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 CCR2P41597 374 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 PSMC5P62195 406 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
CHD2-218ENST00000629346 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 TXNDC11Q6PKC3 985 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
CHD2-218ENST00000629346 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 YAF2Q8IY57 180 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 FAM200AQ8TCP9 573 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 PCDHGA5Q9Y5G8 931 aa13.24□□□□□ -0.29
CHD2-218ENST00000629346 NCANO14594 1321 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 ESYT2A0FGR8 921 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 GOLGA8AA7E2F4 631 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 ZNF197O14709 1029 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 B4GALT5O43286 388 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 HYAL3O43820 417 aaPredicted RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 ARF4P18085 180 aaPredicted RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 IGFBP6P24592 240 aaPredicted RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 CDC27P30260 824 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 HOXA6P31267 233 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 ELF1P32519 619 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 ELAVL2Q12926 359 aaKnown RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 PON2Q15165 354 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 RTL10Q7L3V2 364 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 SKAP1Q86WV1 359 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 GPIHBP1Q8IV16 184 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 DEPDC1BQ8WUY9 529 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 TCP11Q8WWU5 503 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 LSG1Q9H089 658 aaKnown RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 DHX33Q9H6R0 707 aaKnown RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 MTRRQ9UBK8 725 aa13.23□□□□□ -0.29
CHD2-218ENST00000629346 NAP1L2Q9ULW6 460 aaPredicted RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 ASH1LQ9NR48 2969 aaKnown RBP13.23□□□□□ -0.29
CHD2-218ENST00000629346 HEPACAM2A8MVW5 462 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 ARNTLO00327 626 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 ASAP2O43150 1006 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 MYL4P12829 197 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 CEACAM1P13688 526 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 GNA11P29992 359 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 RFC5P40937 340 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 ARPP19P56211 112 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 PTENP60484 403 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 CREB5Q02930 508 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 SPIRE1Q08AE8 756 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 EMC2Q15006 297 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 CYP4A22Q5TCH4 519 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
CHD2-218ENST00000629346 ZSCAN18Q8TBC5 510 aaPredicted RBP13.22□□□□□ -0.29
CHD2-218ENST00000629346 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
CHD2-218ENST00000629346 CXCL16Q9H2A7 254 aa13.22□□□□□ -0.29
CHD2-218ENST00000629346 C8orf33Q9H7E9 229 aaPredicted RBP13.22□□□□□ -0.29
CHD2-218ENST00000629346 LOC400499M0QZD8 3231 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 IGSF10Q6WRI0 2623 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 LNP1A1A4G5 178 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 SPECC1L-ADORA2AF8WAN1 911 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 I3L4J1 428 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 EML1O00423 815 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 SLC27A2O14975 620 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 TDP2O95551 362 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 CAVIN2O95810 425 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 THP07101 528 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 FGFR3P22607 806 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
CHD2-218ENST00000629346 QARSP47897 775 aaKnown RBP13.21□□□□□ -0.29
CHD2-218ENST00000629346 USP11P51784 963 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 MLLT6P55198 1093 aaPredicted RBP13.21□□□□□ -0.29
CHD2-218ENST00000629346 PCBP1Q15365 356 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHD2-218ENST00000629346 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 SLC27A1Q6PCB7 646 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
CHD2-218ENST00000629346 DEFB124Q8NES8 71 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms