RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SMC2O95347 1197 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 CXCL8P10145 99 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 GLUD2P49448 558 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 CASP5P51878 434 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 ERVFC1P60507 584 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 KCNB1Q14721 858 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 NAB2Q15742 525 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 DUSP6Q16828 381 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 SLC10A6Q3KNW5 377 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 PLPP4Q5VZY2 271 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 FUT10Q6P4F1 479 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 SLC39A4Q6P5W5 647 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 FMR1NBQ8N0W7 255 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 CHAMP1Q96JM3 812 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 UBE2ZQ9H832 354 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 MARCH5Q9NX47 278 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 ATG2AQ2TAZ0 1938 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 CASTOR2A6NHX0 329 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 ANKRD63C9JTQ0 380 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 EXTL3O43909 919 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 B4GALT3O60512 393 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 B3GAT3O94766 335 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 PRPF6O94906 941 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 RHOBTB3O94955 611 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 CXCL14O95715 111 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 RPN1P04843 607 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 ADH1AP07327 375 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 IRS1P35568 1242 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 UPP1Q16831 310 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 CTC1Q2NKJ3 1217 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 GLRA4Q5JXX5 417 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 TMEM173Q86WV6 379 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 BEST2Q8NFU1 509 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 CASP10Q92851 521 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 IPO9Q96P70 1041 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 GOLPH3LQ9H4A5 285 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 TRIP11Q15643 1979 aa15.22■□□□□ 0.03
SNRPA1-216ENST00000626000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 C2orf71A6NGG8 1288 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 EFEMP2O95967 443 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 HOXB8P17481 243 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 LRPAP1P30533 357 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 CA8P35219 290 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 NRIP1P48552 1158 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 UBE2HP62256 183 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 DSG1Q02413 1049 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 HYAL1Q12794 435 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 DPYDQ12882 1025 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 TMEM132DQ14C87 1099 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 PTPN14Q15678 1187 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 KNOP1Q1ED39 458 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 KMT5BQ4FZB7 885 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 TMEM184AQ6ZMB5 413 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 C12orf56Q8IXR9 622 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 GPD1LQ8N335 351 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 CACTINQ8WUQ7 758 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 TMEM174Q8WUU8 243 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 SCFD1Q8WVM8 642 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 GSDMAQ96QA5 445 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 HAPLN2Q9GZV7 340 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 CHST7Q9NS84 486 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 DZANK1Q9NVP4 752 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 CLDND1Q9NY35 253 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 NUB1Q9Y5A7 615 aa15.21■□□□□ 0.03
SNRPA1-216ENST00000626000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ZNF233A6NK53 670 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 PODXLO00592 558 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 SYN3O14994 580 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 KLRC4O43908 158 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 PRPF40AO75400 957 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 KIF4AO95239 1232 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ADSSP30520 456 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 PPP1R2P41236 205 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ACOT2P49753 483 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 NDUFV1P49821 464 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 KCNA1Q09470 495 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ADAM15Q13444 863 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 MYBPC2Q14324 1141 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 LEXMQ3ZCV2 418 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 TJAP1Q5JTD0 557 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 BRSK2Q8IWQ3 736 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 GRAMD1CQ8IYS0 662 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ENGASEQ8NFI3 743 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 BCL7CQ8WUZ0 217 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ZMAT2Q96NC0 199 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 GBP4Q96PP9 640 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 ASB2Q96Q27 587 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 FAM213AQ9BRX8 229 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 TTPALQ9BTX7 342 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 OXCT2Q9BYC2 517 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 SLC39A2Q9NP94 309 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 RBAKQ9NYW8 714 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 FNIP2Q9P278 1114 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 MYO7AQ13402 2215 aa15.2■□□□□ 0.02
SNRPA1-216ENST00000626000 LACTBL1A8MY62 500 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms