RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 TUSC3Q13454 348 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 PNOCQ13519 176 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 BMT2Q1RMZ1 405 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 MAFAQ8NHW3 353 aaPredicted RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 POMGNT1Q8WZA1 660 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CCDC34Q96HJ3 373 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 PAAF1Q9BRP4 392 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 AGO2Q9UKV8 859 aaKnown RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 LZTS1Q9Y250 596 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 FAN1Q9Y2M0 1017 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 MYO7AQ13402 2215 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 UBE4BO95155 1302 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 TTC26A0AVF1 554 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CARNS1A5YM72 827 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 ADRB2P07550 413 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 KCNE1P15382 129 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 GARTP22102 1010 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 KRT17Q04695 432 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 SOX4Q06945 474 aaPredicted RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 KCNB1Q14721 858 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 ENOX2Q16206 610 aaKnown RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 KYAT1Q16773 422 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 ARSIQ5FYB1 569 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CRELD2Q6UXH1 353 aaPredicted RBP12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 ZSWIM2Q8NEG5 633 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 TMEM169Q96HH4 297 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 CBWD1Q9BRT8 395 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 PLEKHA5Q9HAU0 1116 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
CCL3L3-201ENST00000612839 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 EFEMP2O95967 443 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 SPAG1Q07617 926 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 SPATA20Q8TB22 786 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 ERCC4Q92889 916 aaPredicted RBP12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 SAAL1Q96ER3 474 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 RPF1Q9H9Y2 349 aaKnown RBP12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 GOLGA2P5Q9HBQ8 144 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 PUF60Q9UHX1 559 aaKnown RBP12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 PCDHGC5Q9Y5F6 944 aa12.33□□□□□ -0.44
CCL3L3-201ENST00000612839 LACTBL1A8MY62 500 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 FSCN2O14926 492 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 CLCNKBP51801 687 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 PPP2R3AQ06190 1150 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 KNOP1Q1ED39 458 aaKnown RBP12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 TIGD5Q53EQ6 642 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 ARMCX5Q6P1M9 558 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 RNF168Q8IYW5 571 aaPredicted RBP12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 C18orf25Q96B23 403 aaPredicted RBP12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 TCF25Q9BQ70 676 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 FAM213AQ9BRX8 229 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 COLEC11Q9BWP8 271 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 PCIF1Q9H4Z3 704 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 NSUN3Q9H649 340 aaKnown RBP12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 AGPAT3Q9NRZ7 376 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 SLC38A7Q9NVC3 462 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 SPTBN5Q9NRC6 3674 aaKnown RBP12.32□□□□□ -0.44
CCL3L3-201ENST00000612839 GOLGA8IPA6NC78 632 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 GOLGA8JA6NMD2 632 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 KIF4AO95239 1232 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 LDHAP00338 332 aaKnown RBP12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 POU5F1Q01860 360 aaKnown RBP12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 HSP90AA2PQ14568 343 aaPredicted RBP12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 UPP1Q16831 310 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 TCEAL5Q5H9L2 206 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 ADGRD2Q7Z7M1 963 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 TMEM130Q8N3G9 435 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 CCDC47Q96A33 483 aaKnown RBP12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 ZBP1Q9H171 429 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 KCTD10Q9H3F6 313 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 TUBGCP4Q9UGJ1 667 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 ADAM28Q9UKQ2 775 aa12.31□□□□□ -0.44
CCL3L3-201ENST00000612839 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 KIAA0391O15091 583 aaKnown RBP12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 CLIC2O15247 247 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 EXTL3O43909 919 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 CTSAP10619 480 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 WNT7BP56706 349 aa12.3□□□□□ -0.44
CCL3L3-201ENST00000612839 SNRPFP62306 86 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms