RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 FAM109BQ6ICB4 259 aaPredicted RBP15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 LRRC55Q6ZSA7 311 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 FRMD5Q7Z6J6 570 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 FAM186BQ8IYM0 893 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 BEST2Q8NFU1 509 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 ENOX1Q8TC92 643 aaKnown RBP15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 TIFAQ96CG3 184 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
SUPT16H-208ENST00000557652 TMEM189-UBE2V1I3L0A0 370 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 ALDH2P05091 517 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 LRPAP1P30533 357 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 GTF2H1P32780 548 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 PMS1P54277 932 aaKnown RBP15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 UBE3AQ05086 875 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 NAB2Q15742 525 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 TPD52L1Q16890 204 aaPredicted RBP15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 DUOXA2Q1HG44 320 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 ZSCAN23Q3MJ62 389 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 SPATA1Q5VX52 437 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 COLGALT2Q8IYK4 626 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 PARD3BQ8TEW8 1205 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 KIF12Q96FN5 646 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 ANKRD36BP1Q96IX9 119 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 ZNF558Q96NG5 402 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 CGRRF1Q99675 332 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 DUSP9Q99956 384 aaKnown RBP15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 FUCA2Q9BTY2 467 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 THAP9Q9H5L6 903 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 CWH43Q9H720 699 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 NRDE2Q9H7Z3 1164 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 KLK14Q9P0G3 267 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 MRPL42Q9Y6G3 142 aaKnown RBP15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 SCN1AP35498 2009 aa15.29■□□□□ 0.04
SUPT16H-208ENST00000557652 ARHGEF37A1IGU5 675 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 GOLGA8IPA6NC78 632 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 GOLGA8JA6NMD2 632 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 GRXCR1A8MXD5 290 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 AKAP3O75969 853 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 POMCP01189 267 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 CA3P07451 260 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 BMPR1AP36894 532 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 RABGGTBP53611 331 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 ELAVL2Q12926 359 aaKnown RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 BFSP1Q12934 665 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 PAN2Q504Q3 1202 aaKnown RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 SEZ6Q53EL9 994 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 KCNT2Q6UVM3 1135 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 TMCO2Q7Z6W1 182 aaPredicted RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 GPR65Q8IYL9 337 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 C11orf84Q9BUA3 381 aaPredicted RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 COLEC11Q9BWP8 271 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 INTS13Q9NVM9 706 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 ARMCX3Q9UH62 379 aaPredicted RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 ITGA11Q9UKX5 1188 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 YBX2Q9Y2T7 364 aaKnown RBP15.28■□□□□ 0.04
SUPT16H-208ENST00000557652 SYCE3A1L190 88 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 SMTNL1A8MU46 457 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 TNNC2P02585 160 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 GALTP07902 379 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 LINC00271P0C7V0 271 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 PNPLA4P41247 253 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 GATMP50440 423 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 VAMP7P51809 220 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 PLCB3Q01970 1234 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 MYL5Q02045 173 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 TAP1Q03518 808 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 JADE1Q6IE81 842 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 DCLRE1AQ6PJP8 1040 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 COLGALT1Q8NBJ5 622 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 FAM212AQ96EL1 285 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 BORCS6Q96GS4 357 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 ZMAT2Q96NC0 199 aaKnown RBP15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 SRRTQ9BXP5 876 aaKnown RBP15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 LMAN2LQ9H0V9 348 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 PDE11AQ9HCR9 933 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 MIOSQ9NXC5 875 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 SPG21Q9NZD8 308 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 FAN1Q9Y2M0 1017 aa15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
SUPT16H-208ENST00000557652 PMM2O15305 246 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 MEFVO15553 781 aaPredicted RBP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 ZC3H11AO75152 810 aaKnown RBP eCLIP15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 DDHD2O94830 711 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 TNNI1P19237 187 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 CASP4P49662 377 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 BCAR1P56945 870 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 STX17P56962 302 aa15.26■□□□□ 0.03
SUPT16H-208ENST00000557652 KRT17Q04695 432 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms