RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 AFF4Q9UHB7 1163 aaKnown RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 OAS3Q9Y6K5 1087 aaKnown RBP6.62□□□□□ -1.35
HMGB1P47-201ENST00000511281 hCG_1642624A0A1W2PR95 340 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 MATN4O95460 622 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 JUNP05412 331 aaKnown RBP6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 PARP1P09874 1014 aaKnown RBP6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 VSIG10L2P0DP72 767 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 BRAFP15056 766 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 JUNBP17275 347 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 CCT5P48643 541 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 FLT3LGP49771 235 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 MRE11P49959 708 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 MEOX1P50221 254 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 SUMO3P55854 103 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 DLX2Q07687 328 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 KHDC1LQ5JSQ8 128 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 ZMYM1Q5SVZ6 1142 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 MPZL3Q6UWV2 235 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 PDZD4Q76G19 769 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 SH2D3CQ8N5H7 860 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 FAM168AQ92567 244 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 CARD11Q9BXL7 1154 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 OR10A2Q9H208 303 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 SLC6A15Q9H2J7 730 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 RLIMQ9NVW2 624 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 MOCS1Q9NZB8 636 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 MYO1AQ9UBC5 1043 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 CPNE7Q9UBL6 633 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 ANAPC4Q9UJX5 808 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 PCDHA1Q9Y5I3 950 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 DGKBQ9Y6T7 804 aa6.61□□□□□ -1.35
HMGB1P47-201ENST00000511281 CARMIL2Q6F5E8 1435 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 PMS2P1A4D2B8 440 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 WNT10BO00744 389 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 APOL1O14791 398 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 FPR1P21462 350 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 CSF2RBP32927 897 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 TECP42680 631 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 PIK3CGP48736 1102 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 HSPA7P48741 367 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADCY7P51828 1080 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 HGFACQ04756 655 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 DUSP2Q05923 314 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 ELF2Q15723 593 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 FAM47AQ5JRC9 791 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 AGBL4Q5VU57 503 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 SEM1Q6ZVN7 128 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 TMEFF1Q8IYR6 380 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 FNIP1Q8TF40 1166 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 MAML1Q92585 1016 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 GCDHQ92947 438 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 SCLT1Q96NL6 688 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 C11orf54Q9H0W9 315 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 NSUN3Q9H649 340 aaKnown RBP6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 LDAHQ9H6V9 325 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 SMURF2Q9HAU4 748 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 SERHLQ9NQF3 203 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 CPA4Q9UI42 421 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 CDC23Q9UJX2 597 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 PCDHA6Q9UN73 950 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 PMF1-BGLAPU3KQ54 211 aa6.6□□□□□ -1.35
HMGB1P47-201ENST00000511281 NPHP1O15259 732 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 PLA2G6O60733 806 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 TOX4O94842 621 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 CD1AP06126 327 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 LIMS1P48059 325 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 PPM1FP49593 454 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 ICA1Q05084 483 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 NFYCQ13952 458 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 TRIM14Q14142 442 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 ATP2B3Q16720 1220 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 MPEG1Q2M385 716 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 SLC35G1Q2M3R5 365 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 PABPC1LQ4VXU2 614 aaKnown RBP6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 PRAMEF14Q5SWL7 426 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 CELF5Q8N6W0 485 aaKnown RBP6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 ATP11CQ8NB49 1132 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 REPS2Q8NFH8 660 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 NAP1L4Q99733 375 aaKnown RBP6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 STK33Q9BYT3 514 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 L2HGDHQ9H9P8 463 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 FAM30AQ9NZY2 134 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 ADAM29Q9UKF5 820 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 GTF2A1LQ9UNN4 478 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 ACTL7AQ9Y615 435 aa6.59□□□□□ -1.35
HMGB1P47-201ENST00000511281 CLCA1A8K7I4 914 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 ABHD16AO95870 558 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 HSD3B1P14060 373 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 CHKAP35790 457 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 RENBPP51606 427 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 SOX8P57073 446 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 BLMHQ13867 455 aa6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 USP10Q14694 798 aaKnown RBP6.58□□□□□ -1.36
HMGB1P47-201ENST00000511281 KIF22Q14807 665 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms