RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 POLHQ9Y253 713 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 XDHP47989 1333 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 KIAA0391O15091 583 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 SLC16A6O15403 523 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 POMCP01189 267 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 SMARCA1P28370 1054 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 MAGEA10P43363 369 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 HK3P52790 923 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 NOGQ13253 232 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 UBXN2BQ14CS0 331 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 PRKD1Q15139 912 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 VPS72Q15906 364 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 ATXN7L2Q5T6C5 722 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 PALM2Q8IXS6 379 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 PHACTR3Q96KR7 559 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 GPR87Q9BY21 358 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 MAN1C1Q9NR34 630 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 DDX20Q9UHI6 824 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 NR2E3Q9Y5X4 410 aa5.19□□□□□ -1.58
TOPBP1-204ENST00000505804 KLRG2A4D1S0 409 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 DRGXA6NNA5 263 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 H3BML4 177 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 H3BUI4 141 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 PLSCR1O15162 318 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 GRM6O15303 877 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 CYP27B1O15528 508 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 UBXN7O94888 489 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 MAN2A2P49641 1150 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 SELENOPP49908 381 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 RRP1BQ14684 758 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 ATP2B3Q16720 1220 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 FLYWCH1Q4VC44 716 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 METTL24Q5JXM2 366 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 DACT2Q5SW24 774 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 DRICH1Q6PGQ1 229 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 SYT12Q8IV01 421 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 DENND1CQ8IV53 801 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 C8orf48Q96LL4 319 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 LRFN3Q9BTN0 628 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 NDC1Q9BTX1 674 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 GSTO2Q9H4Y5 243 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 FBXO34Q9NWN3 711 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 OBP2AQ9NY56 170 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 GABBR1Q9UBS5 961 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 ABCF2Q9UG63 623 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 CLCA2Q9UQC9 943 aa5.18□□□□□ -1.58
TOPBP1-204ENST00000505804 GOLGA6L6A8MZA4 724 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 NT5C1B-RDH14C9J2C7 533 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 F2RL2O00254 374 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 LEFTY2O00292 366 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 ERC2O15083 957 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 MUSKO15146 869 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 AMHP03971 560 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 CD1AP06126 327 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 SLC6A2P23975 617 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 HTR1BP28222 390 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 CHN2P52757 468 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 EFEMP1Q12805 493 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 CRHR2Q13324 411 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 CNGB1Q14028 1251 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 GRM3Q14832 879 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 R3HDM1Q15032 1099 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 LLGL1Q15334 1064 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 PABPC1LQ4VXU2 614 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 DCAF17Q5H9S7 520 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 SLC4A10Q6U841 1118 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 MED25Q71SY5 747 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 OVCH2Q7RTZ1 564 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 IL17RDQ8NFM7 739 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 OR10H5Q8NGA6 315 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 PLBD2Q8NHP8 589 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 KLHDC4Q8TBB5 520 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 DVL3Q92997 716 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 CDK5RAP3Q96JB5 506 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 ARMT1Q9H993 441 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 C1orf112Q9NSG2 853 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 LMBRD1Q9NUN5 540 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 STXBP5LQ9Y2K9 1186 aa5.17□□□□□ -1.58
TOPBP1-204ENST00000505804 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 TUSC2O75896 110 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 PRSS23O95084 383 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 ARIH2O95376 493 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 MTHFD1P11586 935 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 TYRP14679 529 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 MGAT1P26572 445 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 SLC6A4P31645 630 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 NKX6-1P78426 367 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 ADAM17P78536 824 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 PLS1Q14651 629 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 CDSNQ15517 529 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 HSP90AB2PQ58FF8 381 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 NAIF1Q69YI7 327 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 HTR3DQ70Z44 454 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 EXTL1Q92935 676 aa5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 FAM193BQ96PV7 902 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-204ENST00000505804 C1orf43Q9BWL3 253 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms