RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 LAG3P18627 525 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 UBE3AQ05086 875 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 GRIK3Q13003 919 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 STK4Q13043 487 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 KCNB1Q14721 858 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 SLFN12LQ6IEE8 588 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 LRRC55Q6ZSA7 311 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 BMP8AQ7Z5Y6 402 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
CTSA-209ENST00000493522 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
CTSA-209ENST00000493522 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
CTSA-209ENST00000493522 SCFD1Q8WVM8 642 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 ACAP3Q96P50 834 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
CTSA-209ENST00000493522 PRRX2Q99811 253 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 AAASQ9NRG9 546 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
CTSA-209ENST00000493522 RMND1Q9NWS8 449 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 BARX2Q9UMQ3 279 aaPredicted RBP12.63□□□□□ -0.39
CTSA-209ENST00000493522 VWA8A3KMH1 1905 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 TECTAO75443 2155 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 A0A0B4J269 797 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 LOC730098B7Z3J9 87 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 INPPL1O15357 1258 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 CXCL8P10145 99 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 PBX3P40426 434 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 TNFSF9P41273 254 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
CTSA-209ENST00000493522 KYAT1Q16773 422 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 BMT2Q1RMZ1 405 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 GLRA4Q5JXX5 417 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 ZBTB41Q5SVQ8 909 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 ARMCX5Q6P1M9 558 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 MICAL1Q8TDZ2 1067 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 PBXIP1Q96AQ6 731 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 SNX27Q96L92 541 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 ZNF558Q96NG5 402 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 CWH43Q9H720 699 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 TLE6Q9H808 572 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 TLR9Q9NR96 1032 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 AGO2Q9UKV8 859 aaKnown RBP12.62□□□□□ -0.39
CTSA-209ENST00000493522 USP15Q9Y4E8 981 aaPredicted RBP12.62□□□□□ -0.39
CTSA-209ENST00000493522 PCDHA5Q9Y5H7 936 aa12.62□□□□□ -0.39
CTSA-209ENST00000493522 TSC2P49815 1807 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 TMEM221A6NGB7 291 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 M0R296 226 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 PTGESO14684 152 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 B4GALT3O60512 393 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 GLP2RO95838 553 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 CLTAP09496 248 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 SRGAP2BP0DMP2 458 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 GARTP22102 1010 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 HOXD13P35453 343 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 PTPN5P54829 565 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 PPP2R3AQ06190 1150 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 CBX2Q14781 532 aaPredicted RBP12.61□□□□□ -0.39
CTSA-209ENST00000493522 CAMK4Q16566 473 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 KCNT2Q6UVM3 1135 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 HS2ST1Q7LGA3 356 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 ELOA2Q8IYF1 753 aaPredicted RBP12.61□□□□□ -0.39
CTSA-209ENST00000493522 SMYD4Q8IYR2 804 aaPredicted RBP12.61□□□□□ -0.39
CTSA-209ENST00000493522 SAAL1Q96ER3 474 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 CDCA3Q99618 268 aaPredicted RBP12.61□□□□□ -0.39
CTSA-209ENST00000493522 CBWD1Q9BRT8 395 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
CTSA-209ENST00000493522 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 NRDE2Q9H7Z3 1164 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 RPF1Q9H9Y2 349 aaKnown RBP12.61□□□□□ -0.39
CTSA-209ENST00000493522 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 DNAJB4Q9UDY4 337 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
CTSA-209ENST00000493522 CFAP54Q96N23 3096 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 GOLGA8IPA6NC78 632 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 GOLGA8JA6NMD2 632 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
CTSA-209ENST00000493522 FAM189A1O60320 539 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 DDHD2O94830 711 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 KIF20AO95235 890 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 THP07101 528 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 ADSSP30520 456 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 PPM1AP35813 382 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 ACOT2P49753 483 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 BCAR1P56945 870 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 ZXDAP98168 799 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 ENOX2Q16206 610 aaKnown RBP12.6□□□□□ -0.39
CTSA-209ENST00000493522 KNOP1Q1ED39 458 aaKnown RBP12.6□□□□□ -0.39
CTSA-209ENST00000493522 PDE12Q6L8Q7 609 aaKnown RBP12.6□□□□□ -0.39
CTSA-209ENST00000493522 ZNF280BQ86YH2 543 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 NUP62CLQ9H1M0 184 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 PCIF1Q9H4Z3 704 aa12.6□□□□□ -0.39
CTSA-209ENST00000493522 AGPAT3Q9NRZ7 376 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms