RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SH3BGRL2Q9UJC5 107 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CBLCQ9ULV8 474 aa5□□□□□ -1.61
RTN4-213ENST00000485749 SMG5Q9UPR3 1016 aaKnown RBP5□□□□□ -1.61
RTN4-213ENST00000485749 CRYL1Q9Y2S2 319 aa5□□□□□ -1.61
RTN4-213ENST00000485749 MRPL11Q9Y3B7 192 aaKnown RBP5□□□□□ -1.61
RTN4-213ENST00000485749 TIMM13Q9Y5L4 95 aaPredicted RBP5□□□□□ -1.61
RTN4-213ENST00000485749 DDX49Q9Y6V7 483 aaKnown RBP5□□□□□ -1.61
RTN4-213ENST00000485749 TOP2AP11388 1531 aaKnown RBP5□□□□□ -1.61
RTN4-213ENST00000485749 CEP164Q9UPV0 1460 aa5□□□□□ -1.61
RTN4-213ENST00000485749 CNTNAP4Q9C0A0 1308 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 A0A0B4J203 849 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 RRN3P2A6NIE6 340 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 M0R3H8 397 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 ETV2O00321 342 aaPredicted RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 NCAM2O15394 837 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 P4HA2O15460 535 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 NEMFO60524 1076 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 SEMA7AO75326 666 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 H2AFYO75367 372 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 DDX58O95786 925 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 SLC3A2P08195 630 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 P4HA1P13674 534 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 PDE6AP16499 860 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 CD40P25942 277 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 HK2P52789 917 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 LINC00310P59036 64 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 TNK2Q07912 1038 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 CCDC173Q0VFZ6 552 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 RASA2Q15283 850 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 TAF12Q16514 161 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 SETMARQ53H47 684 aaPredicted RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 MUM1L1Q5H9M0 696 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 HABP4Q5JVS0 413 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 CCDC122Q5T0U0 273 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 FIP1L1Q6UN15 594 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 KDELC1Q6UW63 502 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 GBP6Q6ZN66 633 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 ENOSF1Q7L5Y1 443 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 SPPL2CQ8IUH8 684 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 SLC41A1Q8IVJ1 513 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 CISD2Q8N5K1 135 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 MYCT1Q8N699 235 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 PDZD8Q8NEN9 1154 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 NEK9Q8TD19 979 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 DIS3LQ8TF46 1054 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 DPF3Q92784 378 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 KIF1BPQ96EK5 621 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 C1GALT1C1Q96EU7 318 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 CCDC114Q96M63 670 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 CCDC138Q96M89 665 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 JAKMIP1Q96N16 626 aaKnown RBP4.99□□□□□ -1.61
RTN4-213ENST00000485749 SDF4Q9BRK5 362 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 CRB3Q9BUF7 120 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 TMEM60Q9H2L4 133 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 ZNF304Q9HCX3 659 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 TCF7L2Q9NQB0 619 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 HPF1Q9NWY4 346 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 TRAF3IP3Q9Y228 551 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 C2CD2Q9Y426 696 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 KIF3AQ9Y496 699 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 PCDHA2Q9Y5H9 948 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 GPR45Q9Y5Y3 372 aa4.99□□□□□ -1.61
RTN4-213ENST00000485749 SOS1Q07889 1333 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 FITM1A5D6W6 292 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 CCDC69A6NI79 296 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 H3BML4 177 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 RFXAPO00287 272 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MEIS1O00470 390 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 AREL1O15033 823 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 KLHL41O60662 606 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 LETM1O95202 739 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 TBC1D8O95759 1140 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MT-ND3P03897 115 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 DNTTP04053 509 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MYCLP12524 364 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 TNNT1P13805 278 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 SLC9A1P19634 815 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 AGXTP21549 392 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 GNL1P36915 607 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 USP8P40818 1118 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 ECE1P42892 770 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MTNR1BP49286 362 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MAN2A2P49641 1150 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MRE11P49959 708 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 ATXN1P54253 815 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 POLR2FP61218 127 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 RPL11P62913 178 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 AP2B1P63010 937 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 IRF9Q00978 393 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 SPIRE1Q08AE8 756 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 IKQ13123 557 aaPredicted RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 ACAP2Q15057 778 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 PDCD1Q15116 288 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 RABEP1Q15276 862 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 OASLQ15646 514 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 FSCN1Q16658 493 aaKnown RBP4.98□□□□□ -1.61
RTN4-213ENST00000485749 RTP2Q5QGT7 225 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 DSTYKQ6XUX3 929 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 MFSD6Q6ZSS7 791 aa4.98□□□□□ -1.61
RTN4-213ENST00000485749 EP400NLQ6ZTU2 488 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms