RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 EPB41P11171 864 aaKnown RBP17.35■□□□□ 0.37
GPC1-207ENST00000466624 MYOGP15173 224 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 LAG3P18627 525 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 DNAJB2P25686 324 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 PBX2P40425 430 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 GLRA4Q5JXX5 417 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 C11orf57Q6ZUT1 292 aaPredicted RBP17.35■□□□□ 0.37
GPC1-207ENST00000466624 USP37Q86T82 979 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 COLGALT2Q8IYK4 626 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 FAM186BQ8IYM0 893 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 RDH13Q8NBN7 331 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 ENOX1Q8TC92 643 aaKnown RBP17.35■□□□□ 0.37
GPC1-207ENST00000466624 TMC2Q8TDI7 906 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 FAM212AQ96EL1 285 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 KIF12Q96FN5 646 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 UROC1Q96N76 676 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
GPC1-207ENST00000466624 BPIFA3Q9BQP9 254 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 NAT10Q9H0A0 1025 aaKnown RBP17.35■□□□□ 0.37
GPC1-207ENST00000466624 NRDE2Q9H7Z3 1164 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 AAASQ9NRG9 546 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 DDHD2O94830 711 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 CAVIN2O95810 425 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 GNA14O95837 355 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 MARSP56192 900 aaKnown RBP17.34■□□□□ 0.37
GPC1-207ENST00000466624 WNT7BP56706 349 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 CLDN10P78369 228 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 TMEM132DQ14C87 1099 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 SPATA1Q5VX52 437 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 ZNF280BQ86YH2 543 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 WDR49Q8IV35 697 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 TIFAQ96CG3 184 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 BORCS6Q96GS4 357 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 FNBP1Q96RU3 617 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 DNAJC25Q9H1X3 360 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 NKX2-4Q9H2Z4 354 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 METTL14Q9HCE5 456 aaKnown RBP17.34■□□□□ 0.37
GPC1-207ENST00000466624 PDE11AQ9HCR9 933 aa17.34■□□□□ 0.37
GPC1-207ENST00000466624 NFICP08651 508 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 KRT13P13646 458 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 AP3M2P53677 418 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 TAP1Q03518 808 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 BFSP1Q12934 665 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 ANO6Q4KMQ2 910 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 FRMD5Q7Z6J6 570 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 EFCAB13Q8IY85 973 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 BEST2Q8NFU1 509 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 CACTINQ8WUQ7 758 aaKnown RBP17.33■□□□□ 0.36
GPC1-207ENST00000466624 DDX27Q96GQ7 796 aaKnown RBP17.33■□□□□ 0.36
GPC1-207ENST00000466624 TGS1Q96RS0 853 aaKnown RBP17.33■□□□□ 0.36
GPC1-207ENST00000466624 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 PLVAPQ9BX97 442 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 SRRTQ9BXP5 876 aaKnown RBP17.33■□□□□ 0.36
GPC1-207ENST00000466624 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
GPC1-207ENST00000466624 SLC28A3Q9HAS3 691 aa17.33■□□□□ 0.36
GPC1-207ENST00000466624 C5orf67F2Z3F1 127 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 IKBKBO14920 756 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 B4GALT3O60512 393 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 ZC3H11AO75152 810 aaKnown RBP eCLIP17.32■□□□□ 0.36
GPC1-207ENST00000466624 RB1P06400 928 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 GALTP07902 379 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 LRPAP1P30533 357 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
GPC1-207ENST00000466624 PPM1AP35813 382 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 BMPR1AP36894 532 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 ALDH7A1P49419 539 aaKnown RBP17.32■□□□□ 0.36
GPC1-207ENST00000466624 BCAR1P56945 870 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 ERVK-21P61565 698 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 SOX4Q06945 474 aaPredicted RBP17.32■□□□□ 0.36
GPC1-207ENST00000466624 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
GPC1-207ENST00000466624 SPOUT1Q5T280 376 aaKnown RBP17.32■□□□□ 0.36
GPC1-207ENST00000466624 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 COLGALT1Q8NBJ5 622 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 PLEKHO2Q8TD55 490 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 ANKRD36BP1Q96IX9 119 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 ZNF558Q96NG5 402 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 THAP9Q9H5L6 903 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 HCSTQ9UBK5 93 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 DNAJB4Q9UDY4 337 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 PCDHB12Q9Y5F1 795 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 LAMA3Q16787 3333 aa17.32■□□□□ 0.36
GPC1-207ENST00000466624 LRRIQ3A6PVS8 624 aaPredicted RBP17.31■□□□□ 0.36
GPC1-207ENST00000466624 TMEM189-UBE2V1I3L0A0 370 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 ARHGEF15O94989 841 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 ALDH2P05091 517 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 TNNI1P19237 187 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 SLC11A1P49279 550 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 VAMP7P51809 220 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 MYL5Q02045 173 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 SPAG1Q07617 926 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 C18orf25Q96B23 403 aaPredicted RBP17.31■□□□□ 0.36
GPC1-207ENST00000466624 CCDC127Q96BQ5 260 aa17.31■□□□□ 0.36
GPC1-207ENST00000466624 EEF2KMTQ96G04 330 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms