RNA–Protein interactions for RNA: ENST00000457571.1

ERI3-205, Transcript of ERI1 exoribonuclease family member 3, human

TSL 5

Gene ERI3, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERI3-205	ENST00000457571	ZMAT2	Q96NC0	199 aa	Known RBP	27.58	■■■□□ 2.01
ERI3-205	ENST00000457571	TCF25	Q9BQ70	676 aa		27.58	■■■□□ 2.01
ERI3-205	ENST00000457571	HSPBP1	Q9NZL4	362 aa		27.58	■■■□□ 2.01
ERI3-205	ENST00000457571	SSX2IP	Q9Y2D8	614 aa		27.58	■■■□□ 2.01
ERI3-205	ENST00000457571	C2CD2	Q9Y426	696 aa		27.58	■■■□□ 2.01
ERI3-205	ENST00000457571	CIT	O14578	2027 aa		27.58	■■■□□ 2.01
ERI3-205	ENST00000457571	LACTBL1	A8MY62	500 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	TMEM189-UBE2V1	I3L0A0	370 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	TGFB1I1	O43294	461 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	NCK2	O43639	380 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	TADA2A	O75478	443 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	DNAJB1	P25685	340 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	PPP1R2	P41236	205 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	CAMK1	Q14012	370 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	SMC1A	Q14683	1233 aa	Known RBP	27.57	■■■□□ 2
ERI3-205	ENST00000457571	SURF1	Q15526	300 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.57	■■■□□ 2
ERI3-205	ENST00000457571	TMEM173	Q86WV6	379 aa	Predicted RBP	27.57	■■■□□ 2
ERI3-205	ENST00000457571	VPS52	Q8N1B4	723 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	BEST2	Q8NFU1	509 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	SAAL1	Q96ER3	474 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	CXCL16	Q9H2A7	254 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	PCIF1	Q9H4Z3	704 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	MARCH5	Q9NX47	278 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	RBAK	Q9NYW8	714 aa	Predicted RBP	27.57	■■■□□ 2
ERI3-205	ENST00000457571	SF3B1	O75533	1304 aa	Known RBP eCLIP	27.57	■■■□□ 2	4e-8	■■■■■ 135.8
ERI3-205	ENST00000457571	CHD7	Q9P2D1	2997 aa		27.57	■■■□□ 2
ERI3-205	ENST00000457571	MYO9B	Q13459	2157 aa		27.56	■■■□□ 2
ERI3-205	ENST00000457571	ZNF233	A6NK53	670 aa		27.56	■■■□□ 2
ERI3-205	ENST00000457571	CALU	O43852	315 aa	Predicted RBP	27.56	■■■□□ 2
ERI3-205	ENST00000457571	CRELD2	Q6UXH1	353 aa	Predicted RBP	27.56	■■■□□ 2
ERI3-205	ENST00000457571	XXYLT1	Q8NBI6	393 aa		27.56	■■■□□ 2
ERI3-205	ENST00000457571	NOC3L	Q8WTT2	800 aa	Known RBP	27.56	■■■□□ 2
ERI3-205	ENST00000457571	PLXNA4	Q9HCM2	1894 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	FSCN2	O14926	492 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	MEFV	O15553	781 aa	Predicted RBP	27.55	■■■□□ 2
ERI3-205	ENST00000457571	TRAPPC3	O43617	180 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	SLC34A2	O95436	690 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	SOD2	P04179	222 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	MYBPC2	Q14324	1141 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	TMEM132D	Q14C87	1099 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	COBLL1	Q53SF7	1204 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	TMEM174	Q8WUU8	243 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	BCL7C	Q8WUZ0	217 aa	Predicted RBP	27.55	■■■□□ 2
ERI3-205	ENST00000457571	HERC2P3	Q9BVR0	1158 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	ZBP1	Q9H171	429 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	LMBRD1	Q9NUN5	540 aa		27.55	■■■□□ 2
ERI3-205	ENST00000457571	B3GAT3	O94766	335 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	CTSA	P10619	480 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	PAX3	P23760	479 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	STIM1	Q13586	685 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	ZBTB6	Q15916	424 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	UPP1	Q16831	310 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	FUT10	Q6P4F1	479 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	GPR65	Q8IYL9	337 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	FBXL18	Q96ME1	805 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	CDCA3	Q99618	268 aa	Predicted RBP	27.54	■■■□□ 2
ERI3-205	ENST00000457571	KCTD10	Q9H3F6	313 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	TRAF3IP3	Q9Y228	551 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	IRAK3	Q9Y616	596 aa		27.54	■■■□□ 2
ERI3-205	ENST00000457571	GOLGA8IP	A6NC78	632 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	GOLGA8J	A6NMD2	632 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	PODXL	O00592	558 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	KIF4A	O95239	1232 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	UROD	P06132	367 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	LRPAP1	P30533	357 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	CYP2J2	P51589	502 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	CLCNKB	P51801	687 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	ERVFC1	P60507	584 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	SKIV2L	Q15477	1246 aa	Known RBP	27.53	■■■□□ 2
ERI3-205	ENST00000457571	CCDC85B	Q15834	202 aa	Predicted RBP	27.53	■■■□□ 2
ERI3-205	ENST00000457571	PLPP4	Q5VZY2	271 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	JADE1	Q6IE81	842 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	KIAA1841	Q6NSI8	718 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	SLC9A9	Q8IVB4	645 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	PPM1E	Q8WY54	764 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	PAAF1	Q9BRP4	392 aa		27.53	■■■□□ 2
ERI3-205	ENST00000457571	CLIC2	O15247	247 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	EXOC3	O60645	756 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	CSPG5	O95196	566 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	IRS1	P35568	1242 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	SOX4	Q06945	474 aa	Predicted RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	SNRNP35	Q16560	246 aa	Known RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	USP41	Q3LFD5	358 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	TCEAL5	Q5H9L2	206 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	SPATA1	Q5VX52	437 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	PDXDC1	Q6P996	788 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	RNF168	Q8IYW5	571 aa	Predicted RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	MRPL43	Q8N983	215 aa	Known RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	CACTIN	Q8WUQ7	758 aa	Known RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	C18orf25	Q96B23	403 aa	Predicted RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	GOLGA2P5	Q9HBQ8	144 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	MRPL17	Q9NRX2	175 aa	Known RBP	27.52	■■■□□ 2
ERI3-205	ENST00000457571	NUB1	Q9Y5A7	615 aa		27.52	■■■□□ 2
ERI3-205	ENST00000457571	RPL13	P26373	211 aa	Known RBP	27.51	■■□□□ 1.99
ERI3-205	ENST00000457571	CA8	P35219	290 aa		27.51	■■□□□ 1.99
ERI3-205	ENST00000457571	GLUD2	P49448	558 aa		27.51	■■□□□ 1.99
ERI3-205	ENST00000457571	CREM	Q03060	361 aa		27.51	■■□□□ 1.99
ERI3-205	ENST00000457571	SPAG1	Q07617	926 aa		27.51	■■□□□ 1.99
ERI3-205	ENST00000457571	NFIL3	Q16649	462 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms