RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PASD1Q8IV76 773 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 DIS3LQ8TF46 1054 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 ALKBH8Q96BT7 664 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 TYW1Q9NV66 732 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 WDR37Q9Y2I8 494 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 IGSF9BQ9UPX0 1349 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 DOCK11Q5JSL3 2073 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 TMEM221A6NGB7 291 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 VCLP18206 1134 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 IL9RQ01113 521 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 PTP4A2Q12974 167 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CDC16Q13042 620 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 BTG3Q14201 252 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 KYAT3Q6YP21 454 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 RNF111Q6ZNA4 994 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SLC17A8Q8NDX2 589 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SLC35G2Q8TBE7 412 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 TUBGCP5Q96RT8 1024 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 NUDT12Q9BQG2 462 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 GPR88Q9GZN0 384 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 NT5C3AQ9H0P0 336 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 WNT8AQ9H1J5 351 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 KIAA1522Q9P206 1035 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 CYP11B2P19099 503 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 KCNA3P22001 575 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 EPS15P42566 896 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 MAGEA10P43363 369 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 MYBPC2Q14324 1141 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 OTOAQ7RTW8 1153 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SYNE4Q8N205 404 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 KCNN1Q92952 543 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 PTCD3Q96EY7 689 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 DHRS4Q9BTZ2 278 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 IQCGQ9H095 443 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 ZBTB3Q9H5J0 574 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SYNCQ9H7C4 482 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 RASAL2Q9UJF2 1139 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 HDAC9Q9UKV0 1011 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 TTLL13PA6NNM8 815 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 USP4Q13107 963 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 GRM4Q14833 912 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ASIC2Q16515 512 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SH2D5Q6ZV89 423 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 TICAM1Q8IUC6 712 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CTNNBL1Q8WYA6 563 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 C18orf8Q96DM3 657 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 AGAP3Q96P47 875 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 OLFM3Q96PB7 478 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 MYLK2Q9H1R3 596 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 VWA8A3KMH1 1905 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SNAP23O00161 211 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 KLF11O14901 512 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 IBSPP21815 317 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 ABCD1P33897 745 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CDK18Q07002 472 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 SPIRE1Q08AE8 756 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 TRIM68Q6AZZ1 485 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 PSPC1Q8WXF1 523 aaKnown RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 VTI1AQ96AJ9 217 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 FAM81BQ96LP2 452 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 USP29Q9HBJ7 922 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ZNHIT2Q9UHR6 403 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ZNF335Q9H4Z2 1342 aaPredicted RBP5.47□□□□□ -1.53
RIF1-203ENST00000428287 CAPN14A8MX76 684 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 PYGMP11217 842 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 BCRP11274 1271 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ETV4P43268 484 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 ADGRA1Q86SQ6 560 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CADPS2Q86UW7 1296 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 CCDC89Q8N998 374 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 DYDC1Q8WWB3 177 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 MKNK2Q9HBH9 465 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 TBCCD1Q9NVR7 557 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 PCDHA8Q9Y5H6 950 aa5.47□□□□□ -1.53
RIF1-203ENST00000428287 A0A0J9YVX5 310 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 MINDY4BA8MYZ0 360 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 POTECB2RU33 542 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 RGL2O15211 777 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 BUD23O43709 281 aaKnown RBP5.46□□□□□ -1.53
RIF1-203ENST00000428287 PEX1O43933 1283 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 RNASEH1O60930 286 aaKnown RBP5.46□□□□□ -1.53
RIF1-203ENST00000428287 NR2F2P24468 414 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 MAN1A1P33908 653 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 ADRM1Q16186 407 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 UBAP2Q5T6F2 1119 aaKnown RBP5.46□□□□□ -1.53
RIF1-203ENST00000428287 DHRS4L2Q6PKH6 230 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 ZBED8Q8IZ13 594 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 NUP93Q8N1F7 819 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 PLVAPQ9BX97 442 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 MAD2L2Q9UI95 211 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 VILLO15195 856 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 CREB3O43889 395 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 VAV1P15498 845 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 IL6STP40189 918 aaPredicted RBP5.46□□□□□ -1.53
RIF1-203ENST00000428287 GRIA2P42262 883 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 PLOD1Q02809 727 aaPredicted RBP5.46□□□□□ -1.53
RIF1-203ENST00000428287 DRICH1Q6PGQ1 229 aaPredicted RBP5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms