RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 MCCD1P59942 119 aaPredicted RBP21.19■□□□□ 0.98
CCDC47-202ENST00000403162 SAMD1Q6SPF0 538 aaPredicted RBP21.19■□□□□ 0.98
CCDC47-202ENST00000403162 PADI6Q6TGC4 694 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 XXYLT1Q8NBI6 393 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 KAT5Q92993 513 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 CDC42EP4Q9H3Q1 356 aaKnown RBP21.19■□□□□ 0.98
CCDC47-202ENST00000403162 ATP6V0A4Q9HBG4 840 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 PHIPQ8WWQ0 1821 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 WDR46O15213 610 aaKnown RBP21.19■□□□□ 0.98
CCDC47-202ENST00000403162 KCNJ1P48048 391 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 MXI1P50539 228 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 UBXN2AP68543 259 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 FMO1Q01740 532 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 CRELD2Q6UXH1 353 aaPredicted RBP21.19■□□□□ 0.98
CCDC47-202ENST00000403162 OTUD5Q96G74 571 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 RIT2Q99578 217 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 CBWD1Q9BRT8 395 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 CCDC113Q9H0I3 377 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 AAASQ9NRG9 546 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 HSPBP1Q9NZL4 362 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 TISP43B9A030 160 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 C19orf81C9J6K1 198 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 IPO5O00410 1097 aaKnown RBP21.18■□□□□ 0.98
CCDC47-202ENST00000403162 FSCN2O14926 492 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 TP73O15350 636 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 ATP5DP30049 168 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 LDLRAD1Q5T700 205 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 RHBDF2Q6PJF5 856 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 CCDC25Q86WR0 208 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 ERO1BQ86YB8 467 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 PLEKHO2Q8TD55 490 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 CHURC1Q8WUH1 139 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 PSPC1Q8WXF1 523 aaKnown RBP21.18■□□□□ 0.98
CCDC47-202ENST00000403162 SHC3Q92529 594 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 ZNF653Q96CK0 615 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 KREMEN1Q96MU8 473 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 TMEM117Q9H0C3 514 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 GBA2Q9HCG7 927 aaPredicted RBP21.18■□□□□ 0.98
CCDC47-202ENST00000403162 ABCF3Q9NUQ8 709 aa21.18■□□□□ 0.98
CCDC47-202ENST00000403162 USP15Q9Y4E8 981 aaPredicted RBP21.18■□□□□ 0.98
CCDC47-202ENST00000403162 ZNFX1Q9P2E3 1918 aaKnown RBP21.18■□□□□ 0.98
CCDC47-202ENST00000403162 SNRPFP62306 86 aaKnown RBP21.17■□□□□ 0.98
CCDC47-202ENST00000403162 CCDC38Q502W7 563 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 CPNE8Q86YQ8 564 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 BTBD6Q96KE9 485 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 PLVAPQ9BX97 442 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 FEM1BQ9UK73 627 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 CYP26A1O43174 497 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 ITGBL1O95965 494 aaPredicted RBP21.17■□□□□ 0.98
CCDC47-202ENST00000403162 LONRF1Q17RB8 773 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 SLC47A2Q86VL8 602 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 C2orf69Q8N8R5 385 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 ARHGEF2Q92974 986 aaKnown RBP21.17■□□□□ 0.98
CCDC47-202ENST00000403162 DDX23Q9BUQ8 820 aaKnown RBP21.17■□□□□ 0.98
CCDC47-202ENST00000403162 RANBP17Q9H2T7 1088 aaKnown RBP21.17■□□□□ 0.98
CCDC47-202ENST00000403162 FBXO28Q9NVF7 368 aa21.17■□□□□ 0.98
CCDC47-202ENST00000403162 MRPL11Q9Y3B7 192 aaKnown RBP21.17■□□□□ 0.98
CCDC47-202ENST00000403162 SPDYE5A6NIY4 337 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 ITIH2P19823 946 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 MFAP3P55082 362 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 KRT17Q04695 432 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 GALNTL6Q49A17 601 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 FAM133BQ5BKY9 247 aaKnown RBP21.16■□□□□ 0.98
CCDC47-202ENST00000403162 SYDE1Q6ZW31 735 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-202ENST00000403162 FAM160B2Q86V87 743 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 ST6GALNAC4Q9H4F1 302 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 RPAP3Q9H6T3 665 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-202ENST00000403162 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-202ENST00000403162 ZNF536O15090 1300 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 TMEM120BA0PK00 339 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 PLS3P13797 630 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 E2F5Q15329 346 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 SGO2Q562F6 1265 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 VSTM1Q6UX27 236 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 GBP7Q8N8V2 638 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-202ENST00000403162 DYDC1Q8WWB3 177 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 N4BP2L2Q92802 583 aaPredicted RBP21.16■□□□□ 0.98
CCDC47-202ENST00000403162 OPTNQ96CV9 577 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 SLC10A4Q96EP9 437 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 BAIAP2L1Q9UHR4 511 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 AGAP1Q9UPQ3 857 aa21.16■□□□□ 0.98
CCDC47-202ENST00000403162 CLDN3O15551 220 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 DLATP10515 647 aaKnown RBP21.15■□□□□ 0.98
CCDC47-202ENST00000403162 FKBP1BP68106 108 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 GTF2BQ00403 316 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 CDR2Q01850 454 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 ZNF268Q14587 947 aaPredicted RBP21.15■□□□□ 0.98
CCDC47-202ENST00000403162 CCDC174Q6PII3 467 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 PPM1KQ8N3J5 372 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 C12orf42Q96LP6 360 aa21.15■□□□□ 0.98
CCDC47-202ENST00000403162 IRF6O14896 467 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 PLA2G6O60733 806 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 TCEA3O75764 348 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 SUN1O94901 812 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 UBOX5O94941 541 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 ACSL3O95573 720 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 CYP11B1P15538 503 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 MAN1A1P33908 653 aa21.14■□□□□ 0.98
CCDC47-202ENST00000403162 SF3A3Q12874 501 aaKnown RBP eCLIP21.14■□□□□ 0.98
CCDC47-202ENST00000403162 PTK6Q13882 451 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms