RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 NACC1Q96RE7 527 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 POLR3CQ9BUI4 534 aaPredicted RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 DDX23Q9BUQ8 820 aaKnown RBP13.14□□□□□ -0.31
LINC00544-201ENST00000400540 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
LINC00544-201ENST00000400540 ARHGEF35A5YM69 484 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 B3GAT3O94766 335 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 CYP11B2P19099 503 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 NAMPTP43490 491 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 ANAPC15P60006 121 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
LINC00544-201ENST00000400540 ELAVL2Q12926 359 aaKnown RBP13.13□□□□□ -0.31
LINC00544-201ENST00000400540 TRIM29Q14134 588 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 SLC44A4Q53GD3 710 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 CEP120Q8N960 986 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
LINC00544-201ENST00000400540 SHDQ96IW2 340 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 PLA2G2FQ9BZM2 168 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 SPATA6Q9NWH7 488 aaPredicted RBP13.13□□□□□ -0.31
LINC00544-201ENST00000400540 TSC2P49815 1807 aa13.13□□□□□ -0.31
LINC00544-201ENST00000400540 POU2F2P09086 479 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 OR52Z1P0C646 297 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 CEBPBP17676 345 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 RPA1P27694 616 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 PRKCQQ04759 706 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 ZNF174Q15697 407 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 UPP1Q16831 310 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 DCAF4L1Q3SXM0 396 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 ATF7IP2Q5U623 682 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 PDXDC1Q6P996 788 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 RUBCNQ92622 972 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 MCRS1Q96EZ8 462 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 LTB4R2Q9NPC1 389 aa13.12□□□□□ -0.31
LINC00544-201ENST00000400540 NUP210Q8TEM1 1887 aaPredicted RBP13.11□□□□□ -0.31
LINC00544-201ENST00000400540 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 FAM170BA6NMN3 283 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
LINC00544-201ENST00000400540 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
LINC00544-201ENST00000400540 RHOP08100 348 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
LINC00544-201ENST00000400540 RBM25P49756 843 aaKnown RBP13.11□□□□□ -0.31
LINC00544-201ENST00000400540 OSTNP61366 133 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 ROR1Q01973 937 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 NBR1Q14596 966 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 UVSSAQ2YD98 709 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 TSSK4Q6SA08 328 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 TPRG1Q6ZUI0 275 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 DGLUCYQ7Z3D6 616 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 BCO2Q9BYV7 579 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 KCNH3Q9ULD8 1083 aa13.11□□□□□ -0.31
LINC00544-201ENST00000400540 MRPS23Q9Y3D9 190 aaKnown RBP13.11□□□□□ -0.31
LINC00544-201ENST00000400540 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 SHISA7A6NL88 538 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 FCARP24071 287 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 NEK4P51957 841 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 PFKPQ01813 784 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 CSTF1Q05048 431 aaKnown RBP13.1□□□□□ -0.31
LINC00544-201ENST00000400540 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
LINC00544-201ENST00000400540 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 TMEM130Q8N3G9 435 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 TCEAL4Q96EI5 215 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 ZMAT2Q96NC0 199 aaKnown RBP13.1□□□□□ -0.31
LINC00544-201ENST00000400540 CDT1Q9H211 546 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 HEBP1Q9NRV9 189 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
LINC00544-201ENST00000400540 PODXLO00592 558 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
LINC00544-201ENST00000400540 ECI2O75521 394 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 SEC24AO95486 1093 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
LINC00544-201ENST00000400540 GRM5P41594 1212 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 EFNA5P52803 228 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 ARPP19P56211 112 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 GRM2Q14416 872 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 ZNF528Q3MIS6 628 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 PRSS36Q5K4E3 855 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 TTC38Q5R3I4 469 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 HAUS3Q68CZ6 603 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 RALGAPA1Q6GYQ0 2036 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 ANKS3Q6ZW76 656 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 UROC1Q96N76 676 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 ACO2Q99798 780 aaKnown RBP13.09□□□□□ -0.31
LINC00544-201ENST00000400540 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 OSBPL6Q9BZF3 934 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 FBXO4Q9UKT5 387 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 KIAA1024Q9UPX6 916 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 NCOR2Q9Y618 2525 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 TCHHQ07283 1943 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 PHLPP2Q6ZVD8 1323 aa13.09□□□□□ -0.31
LINC00544-201ENST00000400540 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms