RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SYT14Q8NB59 555 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CPEB3Q8NE35 698 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SHCBP1Q8NEM2 672 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 GPBAR1Q8TDU6 330 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF501Q96CX3 271 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FAM122AQ96E09 287 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF799Q96GE5 643 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WRNIP1Q96S55 665 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MMS19Q96T76 1030 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 GDF15Q99988 308 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CABLES2Q9BTV7 478 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PDZD7Q9H5P4 517 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 RETREG1Q9H6L5 497 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DDX31Q9H8H2 851 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TRIM45Q9H8W5 580 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CLK4Q9HAZ1 481 aaKnown RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 EPS15L1Q9UBC2 864 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MAN1B1Q9UKM7 699 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 RARRES3Q9UL19 164 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF652Q9Y2D9 606 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DTX4Q9Y2E6 619 aa-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MINK1Q8N4C8 1332 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PTPRQQ9UMZ3 2332 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 A6NNC1 897 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 MARCH11A6NNE9 402 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PRRT4C9JH25 899 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ZNF878C9JN71 531 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 HDAC3O15379 428 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FGF10O15520 208 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SLC26A4O43511 780 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ALDH1A2O94788 518 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ANGP03950 147 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ACAA1P09110 424 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SELLP14151 372 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 POU3F2P20265 443 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NR1D1P20393 614 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ATP5F1P24539 256 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CYP2C18P33260 490 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ELAVL1Q15717 326 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 KIZQ2M2Z5 673 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ARSHQ5FYA8 562 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TFDP3Q5H9I0 405 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ARHGAP11AQ6P4F7 1023 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L2Q6R6M4 530 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NETO2Q8NC67 525 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NFATC2IPQ8NCF5 419 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ADAD2Q8NCV1 583 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DEPTORQ8TB45 409 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 AENQ8WTP8 325 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ATXN2LQ8WWM7 1075 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PHF21BQ96EK2 531 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 BCANQ96GW7 911 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PRIMPOLQ96LW4 560 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TBX15Q96SF7 602 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ACO2Q99798 780 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SLITRK2Q9H156 845 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WNT8AQ9H1J5 351 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SMURF1Q9HCE7 757 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TMEM8AQ9HCN3 771 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TXNRD2Q9NNW7 524 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NGRNQ9NPE2 291 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ASH2LQ9UBL3 628 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ARMCX3Q9UH62 379 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 TCFL5Q9UL49 500 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 R3HDM2Q9Y2K5 976 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CHST2Q9Y4C5 530 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WIF1Q9Y5W5 379 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ASXL3Q9C0F0 2248 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ASTN2O75129 1339 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 WDR87Q6ZQQ6 2873 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 LTBP4Q8N2S1 1624 aa-1.69□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FASNP49327 2511 aaKnown RBP-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 PLXNB1O43157 2135 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 NDUFAF8A1L188 74 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FAM83GA6ND36 823 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L5A8MUK1 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L15C9J2P7 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L13C9JLJ4 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L12C9JPN9 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L11C9JVI0 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L21D6R901 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L18D6R9N7 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L22D6RA61 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L23D6RBM5 183 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L17D6RBQ6 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L19D6RCP7 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L20D6RJB6 530 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 IRF6O14896 467 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 FANCGO15287 622 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CBR3O75828 277 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DNAJB5O75953 348 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 HAPLN1P10915 354 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 ATP6V1B1P15313 513 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DDX6P26196 483 aaKnown RBP eCLIP-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 SSFA2P28290 1259 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CDC25AP30304 524 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 STAT5AP42229 794 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 DRG2P55039 364 aaKnown RBP-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 CORO7P57737 925 aa-1.7□□□□□ -2.68
RNU6-1340P-201ENST00000384438 USP17L24Q0WX57 530 aa-1.7□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms