RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TERF2Q15554 542 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 TLDC1Q6P9B6 456 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.65□□□□□ -0.86
UBR4-201ENST00000375218 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
UBR4-201ENST00000375218 PIP4K2CQ8TBX8 421 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 DIS3LQ8TF46 1054 aaKnown RBP9.65□□□□□ -0.86
UBR4-201ENST00000375218 SMC6Q96SB8 1091 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 BCL2L12Q9HB09 334 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 MTIF2P46199 727 aaKnown RBP9.65□□□□□ -0.86
UBR4-201ENST00000375218 HADHBP55084 474 aaKnown RBP9.65□□□□□ -0.86
UBR4-201ENST00000375218 PCSK7Q16549 785 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 EXOC4Q96A65 974 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 ACPTQ9BZG2 426 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 CD93Q9NPY3 652 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.86
UBR4-201ENST00000375218 CTAGE15A4D2H0 777 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 TTC34A8MYJ7 566 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 CTAGE8P0CG41 777 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 KDSRQ06136 332 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 PPFIA1Q13136 1202 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 KRTCAP3Q53RY4 240 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 RALYLQ86SE5 291 aaKnown RBP9.65□□□□□ -0.87
UBR4-201ENST00000375218 CTAGE6Q86UF2 777 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 CTAGE4Q8IX94 777 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 TCF12Q99081 682 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.87
UBR4-201ENST00000375218 CYP4F12Q9HCS2 524 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 DNAAF2Q9NVR5 837 aaKnown RBP9.65□□□□□ -0.87
UBR4-201ENST00000375218 RASAL2Q9UJF2 1139 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 EXOC6BQ9Y2D4 811 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 AK5Q9Y6K8 562 aa9.65□□□□□ -0.87
UBR4-201ENST00000375218 BRCA1P38398 1863 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 EIF1AXP47813 144 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 OLR1P78380 273 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 ASPHQ12797 758 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 MBTPS1Q14703 1052 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 GPR158Q5T848 1215 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 C11orf88Q6PI97 169 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 FAM178BQ8IXR5 827 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 ADAMTS18Q8TE60 1221 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 TRIM56Q9BRZ2 755 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 SEMA3GQ9NS98 782 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 LRRC4BQ9NT99 713 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 TRMT13Q9NUP7 481 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 IFIT3O14879 490 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 ADCY3O60266 1144 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 HSD3B1P14060 373 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 SMYD1Q8NB12 490 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 CENPIQ92674 756 aaPredicted RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 ACSF2Q96CM8 615 aaPredicted RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 TUBGCP3Q96CW5 907 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 MFSD14AQ96MC6 490 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 SAP130Q9H0E3 1048 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 NCOR1P1Q9H4R4 102 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 FAM153AQ9UHL3 310 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 FOCADQ5VW36 1801 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 JCADQ9P266 1359 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 RGPD3A6NKT7 1758 aaPredicted RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 RGPD4Q7Z3J3 1758 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 USP1O94782 785 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 CAPNS1P04632 268 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 CYP19A1P11511 503 aaPredicted RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 ETV3P41162 512 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 HNMTP50135 292 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 CCR3P51677 355 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 DCAF7P61962 342 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 CXorf57Q6NSI4 855 aaKnown RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 XKR5Q6UX68 686 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 SLC22A9Q8IVM8 553 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 CCT7Q99832 543 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 PSTPIP2Q9H939 334 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 ZFP37Q9Y6Q3 630 aaPredicted RBP9.64□□□□□ -0.87
UBR4-201ENST00000375218 ITIH6Q6UXX5 1313 aa9.64□□□□□ -0.87
UBR4-201ENST00000375218 KPNA5O15131 536 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 IGHA2P01877 340 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 POU2F2P09086 479 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 CKBP12277 381 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 DPP6P42658 865 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 GRK6P43250 576 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 ZNF423Q2M1K9 1284 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 CCDC121Q6ZUS5 278 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 CHST13Q8NET6 341 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 PPP1R13BQ96KQ4 1090 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 HS6ST2Q96MM7 605 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 TXLNGYQ9BZA5 131 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 RHBGQ9H310 441 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 ATP6V1DQ9Y5K8 247 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 GOLGA6L7A0A1B0GV03 622 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 M0R2C6 588 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 TPP1O14773 563 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 AP1G1O43747 822 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 DTNBO60941 627 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms