RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 DDX27Q96GQ7 796 aaKnown RBP17.35■□□□□ 0.37
FDPS-201ENST00000356657 TGS1Q96RS0 853 aaKnown RBP17.35■□□□□ 0.37
FDPS-201ENST00000356657 FNBP1Q96RU3 617 aa17.35■□□□□ 0.37
FDPS-201ENST00000356657 METTL14Q9HCE5 456 aaKnown RBP17.35■□□□□ 0.37
FDPS-201ENST00000356657 PCDHB12Q9Y5F1 795 aa17.35■□□□□ 0.37
FDPS-201ENST00000356657 MRPL42Q9Y6G3 142 aaKnown RBP17.35■□□□□ 0.37
FDPS-201ENST00000356657 LACTBL1A8MY62 500 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 C5orf67F2Z3F1 127 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 POMCP01189 267 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 PRKCSHP14314 528 aaPredicted RBP17.34■□□□□ 0.37
FDPS-201ENST00000356657 RPL9P32969 192 aaKnown RBP17.34■□□□□ 0.37
FDPS-201ENST00000356657 GATMP50440 423 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 MCCD1P59942 119 aaPredicted RBP17.34■□□□□ 0.37
FDPS-201ENST00000356657 TMEM132DQ14C87 1099 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 CEP135Q66GS9 1140 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 LRRC55Q6ZSA7 311 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 WDR49Q8IV35 697 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 BEST2Q8NFU1 509 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 TMC2Q8TDI7 906 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 NOC3LQ8WTT2 800 aaKnown RBP17.34■□□□□ 0.37
FDPS-201ENST00000356657 KIF12Q96FN5 646 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 ZNF558Q96NG5 402 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 CWH43Q9H720 699 aa17.34■□□□□ 0.37
FDPS-201ENST00000356657 YBX2Q9Y2T7 364 aaKnown RBP17.34■□□□□ 0.37
FDPS-201ENST00000356657 LCHNA4D1U4 455 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 GOLGA8IPA6NC78 632 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 TRIM49BA6NDI0 452 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 GOLGA8JA6NMD2 632 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 KRT13P13646 458 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 PBX2P40425 430 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 PMS1P54277 932 aaKnown RBP17.33■□□□□ 0.37
FDPS-201ENST00000356657 ERVK-21P61565 698 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 CLDN10P78369 228 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 TAP1Q03518 808 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 NAB2Q15742 525 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 ZBTB6Q15916 424 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 SPOUT1Q5T280 376 aaKnown RBP17.33■□□□□ 0.37
FDPS-201ENST00000356657 FILIP1Q7Z7B0 1213 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 COLGALT2Q8IYK4 626 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 FAM186BQ8IYM0 893 aa17.33■□□□□ 0.37
FDPS-201ENST00000356657 MYO9BQ13459 2157 aa17.33■□□□□ 0.36
FDPS-201ENST00000356657 TMEM189-UBE2V1I3L0A0 370 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 IKBKBO14920 756 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 STX10O60499 249 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 ZC3H11AO75152 810 aaKnown RBP eCLIP17.32■□□□□ 0.361e-12■■□□□ 12.7
FDPS-201ENST00000356657 AKAP3O75969 853 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 ALDH2P05091 517 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 LINC00271P0C7V0 271 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 BMPR1AP36894 532 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
FDPS-201ENST00000356657 ZSCAN23Q3MJ62 389 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 SPATA1Q5VX52 437 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 FRMD5Q7Z6J6 570 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 FAM114A1Q8IWE2 563 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 ZMAT2Q96NC0 199 aaKnown RBP17.32■□□□□ 0.36
FDPS-201ENST00000356657 DUSP9Q99956 384 aaKnown RBP17.32■□□□□ 0.36
FDPS-201ENST00000356657 BPIFA3Q9BQP9 254 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 C11orf84Q9BUA3 381 aaPredicted RBP17.32■□□□□ 0.36
FDPS-201ENST00000356657 NKX2-4Q9H2Z4 354 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 NRDE2Q9H7Z3 1164 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 PLAGL2Q9UPG8 496 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 CHD9Q3L8U1 2897 aa17.32■□□□□ 0.36
FDPS-201ENST00000356657 SYCE3A1L190 88 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 MEFVO15553 781 aaPredicted RBP17.31■□□□□ 0.36
FDPS-201ENST00000356657 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 LRPAP1P30533 357 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 AFF1P51825 1210 aaKnown RBP17.31■□□□□ 0.36
FDPS-201ENST00000356657 MARSP56192 900 aaKnown RBP17.31■□□□□ 0.36
FDPS-201ENST00000356657 BCAR1P56945 870 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 UBE3AQ05086 875 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 BFSP1Q12934 665 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 GLRA4Q5JXX5 417 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 JADE1Q6IE81 842 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 COLGALT1Q8NBJ5 622 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 ZSWIM2Q8NEG5 633 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 ENOX1Q8TC92 643 aaKnown RBP17.31■□□□□ 0.36
FDPS-201ENST00000356657 PARD3BQ8TEW8 1205 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 ANKRD36BP1Q96IX9 119 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 CGRRF1Q99675 332 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 MIOSQ9NXC5 875 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 ARMCX3Q9UH62 379 aaPredicted RBP17.31■□□□□ 0.36
FDPS-201ENST00000356657 ITGA11Q9UKX5 1188 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 DDHD2O94830 711 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 TNNC2P02585 160 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 GALTP07902 379 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 MYOGP15173 224 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 GTF2H1P32780 548 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 CTNNB1P35222 781 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 CASP4P49662 377 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 ZNF280BQ86YH2 543 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 TMEM169Q96HH4 297 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 FUCA2Q9BTY2 467 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 COLEC11Q9BWP8 271 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 THAP9Q9H5L6 903 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms