RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GINS2Q9Y248 185 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 UMODL1Q5DID0 1318 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 ZC3H11AO75152 810 aaKnown RBP eCLIP24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 CREG2Q8IUH2 290 aa24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 KIAA0319LQ8IZA0 1049 aa24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 LMBR1Q8WVP7 490 aa24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 RABGGTAQ92696 567 aa24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 PRMT7Q9NVM4 692 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 HYOU1Q9Y4L1 999 aa24.13■■□□□ 1.45
PDLIM2-203ENST00000339162 GPR25O00155 361 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 RGS2P41220 211 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 BEX3Q00994 111 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 NCOA4Q13772 614 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 AMHR2Q16671 573 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 KAT2BQ92831 832 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 MAP7D2Q96T17 732 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 NFKBIZQ9BYH8 718 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 FAM49AQ9H0Q0 323 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 INTUQ9ULD6 942 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 FTLP02792 175 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 RHOXF2BP0C7M4 288 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 FGFR4P22455 802 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 TPCN2Q8NHX9 752 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 SLC35G2Q8TBE7 412 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 CTNNBL1Q8WYA6 563 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 RHOXF2Q9BQY4 288 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 ARHGAP39Q9C0H5 1083 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 RNF216Q9NWF9 866 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 CHORDC1Q9UHD1 332 aaPredicted RBP24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 TNFSF13BQ9Y275 285 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 NUB1Q9Y5A7 615 aa24.12■■□□□ 1.45
PDLIM2-203ENST00000339162 PDE6CP51160 858 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 TFAMQ00059 246 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 FMO1Q01740 532 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 MEI1Q5TIA1 1274 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 WDR49Q8IV35 697 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 TMEM130Q8N3G9 435 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 GPR161Q8N6U8 529 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 DNAH12Q6ZR08 3092 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 TMEM253P0C7T8 217 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 CXCL8P10145 99 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 H2AFXP16104 143 aaPredicted RBP24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 SREBF2Q12772 1141 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 KIZQ2M2Z5 673 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 CCDC102AQ96A19 550 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 APBA2Q99767 749 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 PARD6BQ9BYG5 372 aa24.11■■□□□ 1.45
PDLIM2-203ENST00000339162 SMIM10L2AP0DMW4 78 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 SMIM10L2BP0DMW5 78 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 NOP14P78316 857 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 LRRC57Q8N9N7 239 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 MS4A14Q96JA4 679 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 ANKZF1Q9H8Y5 726 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 F2P00734 622 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 PRLRP16471 622 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 TCP1P17987 556 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 ARF4P18085 180 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 POU5F1BQ06416 359 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 CUL2Q13617 745 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 HIC1Q14526 733 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 ENOSF1Q7L5Y1 443 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 EFCAB13Q8IY85 973 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 DDX1Q92499 740 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 PDZD7Q9H5P4 517 aa24.1■■□□□ 1.45
PDLIM2-203ENST00000339162 KAT6AQ92794 2004 aa24.09■■□□□ 1.45
PDLIM2-203ENST00000339162 ANKRD62A6NC57 917 aa24.09■■□□□ 1.45
PDLIM2-203ENST00000339162 ZEB2O60315 1214 aa24.09■■□□□ 1.45
PDLIM2-203ENST00000339162 TBC1D8O95759 1140 aa24.09■■□□□ 1.45
PDLIM2-203ENST00000339162 CYP4F22Q6NT55 531 aa24.09■■□□□ 1.45
PDLIM2-203ENST00000339162 GPBP1L1Q9HC44 474 aaPredicted RBP24.09■■□□□ 1.45
PDLIM2-203ENST00000339162 A0A0A6YYK5 440 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 MYL3P08590 195 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 CLCN6P51797 869 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 MYL6P60660 151 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 CDR2Q01850 454 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 CKAP4Q07065 602 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 IFI16Q16666 785 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 DUOXA2Q1HG44 320 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 DAAM2Q86T65 1068 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 SOCS4Q8WXH5 440 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 RFFLQ8WZ73 363 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 ISCUQ9H1K1 167 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 COG5Q9UP83 839 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 ATP8B3O60423 1300 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 ATMINO43313 823 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 ACO1P21399 889 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 C2orf54Q08AI8 447 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 FAM187BQ17R55 369 aa24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 IFNLR1Q8IU57 520 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-203ENST00000339162 CLTAP09496 248 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 STAG3L1P0CL83 205 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 MFSD10Q14728 455 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 TMEM270Q6UE05 265 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 PNKPQ96T60 521 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 RPF1Q9H9Y2 349 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 CDHR5Q9HBB8 845 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 NCANO14594 1321 aa24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 MEFVO15553 781 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 BUB1BO60566 1050 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-203ENST00000339162 TMEM191BP0C7N4 346 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms