RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 SLC35A4Q96G79 324 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 CDK5RAP3Q96JB5 506 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 LRRC37BQ96QE4 947 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 RPS6KC1Q96S38 1066 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 C1orf43Q9BWL3 253 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 NAA15Q9BXJ9 866 aaKnown RBP3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 RSAD1Q9HA92 442 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 FNIP2Q9P278 1114 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 USP25Q9UHP3 1055 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 PHTF1Q9UMS5 762 aa3.5□□□□□ -1.85
SCARNA4-202ENST00000625402 A0A088AWK7 358 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 UBE2QL1A1L167 161 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CXorf49A8MYA2 514 aaPredicted RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 SASH1O94885 1247 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 AHSGP02765 367 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 PHKG2P15735 406 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 NPR1P16066 1061 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 PRDX5P30044 214 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 TM4SF4P48230 202 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 FLT3LGP49771 235 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CTXN1P60606 82 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 RAC3P60763 192 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM193AP78312 1265 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 SP140Q13342 867 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 MRPL49Q13405 166 aaKnown RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 PKN1Q16512 942 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 LONRF1Q17RB8 773 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 FLYWCH1Q4VC44 716 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 RNF220Q5VTB9 566 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CIAPIN1Q6FI81 312 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM180AQ6UWF9 173 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 GADL1Q6ZQY3 521 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 TMEM151BQ8IW70 566 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 LRRC56Q8IYG6 542 aaPredicted RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CMTM4Q8IZR5 234 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 SH2D3CQ8N5H7 860 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 OR5M3Q8NGP4 307 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 IL31RAQ8NI17 732 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 FEZF2Q8TBJ5 459 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 LRTOMTQ8WZ04 291 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CYFIP2Q96F07 1278 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 IL17RAQ96F46 866 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 MRGPRX1Q96LB2 322 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 GNRHR2Q96P88 292 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 STRBPQ96SI9 672 aaKnown RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CDC5LQ99459 802 aaKnown RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 LSM14BQ9BX40 385 aaKnown RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 PLA2G12BQ9BX93 195 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CPEB1Q9BZB8 566 aaKnown RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 ZNF700Q9H0M5 742 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 TMEM140Q9NV12 185 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 CALCOCO1Q9P1Z2 691 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 FEZ2Q9UHY8 353 aaPredicted RBP3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 TAGLN3Q9UI15 199 aa3.49□□□□□ -1.85
SCARNA4-202ENST00000625402 PNPLA7Q6ZV29 1317 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PMS2P1A4D2B8 440 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PRSS29PA6NIE9 313 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 H3BUI4 141 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 MYO1FO00160 1098 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 GOLIM4O00461 696 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 GRM6O15303 877 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 CDC14BO60729 498 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PQBP1O60828 265 aaKnown RBP3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 MATN4O95460 622 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 NBPF7P0C2Y1 421 aaPredicted RBP3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 RAP2AP10114 183 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 KCNC1P48547 511 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 GZMKP49863 264 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 ALDH5A1P51649 535 aaPredicted RBP3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 EPHB4P54760 987 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 APBA1Q02410 837 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PICALMQ13492 652 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 ZNF568Q3ZCX4 644 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 CCDC157Q569K6 752 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 FAM47AQ5JRC9 791 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 DACT2Q5SW24 774 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 THEMIS2Q5TEJ8 643 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 XRRA1Q6P2D8 792 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 DARS2Q6PI48 645 aaKnown RBP3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 LCNL1Q6ZST4 164 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 SEM1Q6ZVN7 128 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 FRMD5Q7Z6J6 570 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 XYLT1Q86Y38 959 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 SPICE1Q8N0Z3 855 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 KRT78Q8N1N4 520 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 FBXO41Q8TF61 875 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 ANKS1AQ92625 1134 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 TMEM176AQ96HP8 235 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 C11orf54Q9H0W9 315 aaPredicted RBP3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 ADAM7Q9H2U9 754 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 FBXO34Q9NWN3 711 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 STK32BQ9NY57 414 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 RTEL1Q9NZ71 1219 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PUF60Q9UHX1 559 aaKnown RBP3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PCDHA6Q9UN73 950 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 PCDHA1Q9Y5I3 950 aa3.48□□□□□ -1.85
SCARNA4-202ENST00000625402 USP19O94966 1318 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 A0A1W2PRX2 142 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 TCRBV7S2A1N4TA0A589 114 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms