RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 NSUN3Q9H649 340 aaKnown RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 TLR9Q9NR96 1032 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 SLC38A7Q9NVC3 462 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 FAN1Q9Y2M0 1017 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 FNDC1Q4ZHG4 1894 aaPredicted RBP10.95□□□□□ -0.66
MKS1-208ENST00000579358 CHD9Q3L8U1 2897 aa10.95□□□□□ -0.66
MKS1-208ENST00000579358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 SMIM28A0A1B0GU29 152 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 TTC26A0AVF1 554 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 NT5C1B-RDH14C9J2C7 533 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 FSCN2O14926 492 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 PRPF6O94906 941 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 RHOBTB3O94955 611 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 RPN1P04843 607 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 ADRB2P07550 413 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 PRR29P0C7W0 189 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 CXCL8P10145 99 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 DNAJB1P25685 340 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 ADSSP30520 456 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 OR1G1P47890 313 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 UBE2HP62256 183 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 SNRPFP62306 86 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 KCNB1Q14721 858 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 SLC10A6Q3KNW5 377 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 DDX53Q86TM3 631 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 TMEM173Q86WV6 379 aaPredicted RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 CD302Q8IX05 232 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 GLIS3Q8NEA6 775 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 SCFD1Q8WVM8 642 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 POMGNT1Q8WZA1 660 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 PPP2R3CQ969Q6 453 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 UROC1Q96N76 676 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 COLEC11Q9BWP8 271 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 RPF1Q9H9Y2 349 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 SLC39A2Q9NP94 309 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 NGRNQ9NPE2 291 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 MARCH5Q9NX47 278 aa10.94□□□□□ -0.66
MKS1-208ENST00000579358 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 CPSF3Q9UKF6 684 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 AGO2Q9UKV8 859 aaKnown RBP10.94□□□□□ -0.66
MKS1-208ENST00000579358 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 TISP43B9A030 160 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 TMEM189-UBE2V1I3L0A0 370 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 MEFVO15553 781 aaPredicted RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 KIF20AO95235 890 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 EFEMP2O95967 443 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 LDHAP00338 332 aaKnown RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 TNFSF9P41273 254 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 PPP2R3AQ06190 1150 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 ENOX2Q16206 610 aaKnown RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 SEZ6Q53EL9 994 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 GLRA4Q5JXX5 417 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 ARMCX5Q6P1M9 558 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 RNF168Q8IYW5 571 aaPredicted RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 MICALL1Q8N3F8 863 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 KIAA0895Q8NCT3 520 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 BCL7CQ8WUZ0 217 aaPredicted RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 ZMAT2Q96NC0 199 aaKnown RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 TCF25Q9BQ70 676 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 ZBP1Q9H171 429 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 CXCL16Q9H2A7 254 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 IKZF4Q9H2S9 585 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 CGNQ9P2M7 1197 aaKnown RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 PRG3Q9Y2Y8 225 aaPredicted RBP10.93□□□□□ -0.66
MKS1-208ENST00000579358 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 CHD7Q9P2D1 2997 aa10.93□□□□□ -0.66
MKS1-208ENST00000579358 CASTOR2A6NHX0 329 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 XPOTO43592 962 aaKnown RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 NCK2O43639 380 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 KINO60870 393 aaKnown RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 GADD45BO75293 160 aaPredicted RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 SOD2P04179 222 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 CTSAP10619 480 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 HOXD13P35453 343 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 IRS1P35568 1242 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 ERVFC1P60507 584 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 STK4Q13043 487 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 SMC1AQ14683 1233 aaKnown RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 COL19A1Q14993 1142 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 KNOP1Q1ED39 458 aaKnown RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 TCEAL5Q5H9L2 206 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 ZBTB41Q5SVQ8 909 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 TMC7Q7Z402 723 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 C12orf56Q8IXR9 622 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 SPATA20Q8TB22 786 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 GOLGA5Q8TBA6 731 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 DDX27Q96GQ7 796 aaKnown RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 GSDMAQ96QA5 445 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 CDCA3Q99618 268 aaPredicted RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 HERC2P3Q9BVR0 1158 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 GTPBP4Q9BZE4 634 aaKnown RBP10.92□□□□□ -0.66
MKS1-208ENST00000579358 ASB7Q9H672 318 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 KIAA1586Q9HCI6 787 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 ENTPD7Q9NQZ7 604 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 AGPAT3Q9NRZ7 376 aa10.92□□□□□ -0.66
MKS1-208ENST00000579358 RMND1Q9NWS8 449 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms