RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 EDEM3Q9BZQ6 932 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ATXN3LQ9H3M9 355 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 EPS8L2Q9H6S3 715 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 XAB2Q9HCS7 855 aaKnown RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 NECTIN3Q9NQS3 549 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RAD18Q9NS91 495 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 GFOD1Q9NXC2 390 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ADGRE2Q9UHX3 823 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ZNF711Q9Y462 761 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 PCDHA2Q9Y5H9 948 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 NUMBLQ9Y6R0 609 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 H0Y8X5 98 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 TMPRSS2O15393 492 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 SIGLEC6O43699 453 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ADAM11O75078 769 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 CLASP2O75122 1294 aaKnown RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 LRIG2O94898 1065 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 PLATP00750 562 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 KCNA2P16389 499 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 PORP16435 677 aaPredicted RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 DESP17661 470 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 RXRBP28702 533 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ATP5DP30049 168 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 CDC25BP30305 580 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 SLC7A1P30825 629 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ETV3P41162 512 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 PDE6CP51160 858 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 CCR5P51681 352 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ZNF132P52740 706 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 IFI35P80217 286 aaPredicted RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ACVR2BQ13705 512 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 EIF4A2Q14240 407 aaKnown RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 RASA2Q15283 850 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 UBE3CQ15386 1083 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 TIGD6Q17RP2 521 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 C3orf36Q3SXR2 165 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 C5orf22Q49AR2 442 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ODF2Q5BJF6 829 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 PRRT3Q5FWE3 981 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 HABP4Q5JVS0 413 aaKnown RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 EXOSC6Q5RKV6 272 aaKnown RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 NAA16Q6N069 864 aaPredicted RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 BBS12Q6ZW61 710 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 TMTC3Q6ZXV5 915 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 B4GALNT4Q76KP1 1039 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 EPHX4Q8IUS5 362 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 OXR1Q8N573 874 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 AVL9Q8NBF6 648 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 NRG4Q8WWG1 115 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 RTF1Q92541 710 aaKnown RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 N4BP2L2Q92802 583 aaPredicted RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ZUFSPQ96AP4 578 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 C18orf8Q96DM3 657 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 JAKMIP1Q96N16 626 aaKnown RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 FCRL3Q96P31 734 aaPredicted RBP4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 FANCD2OSQ96PS1 177 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 YME1L1Q96TA2 773 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 PI4K2AQ9BTU6 479 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 CARD10Q9BWT7 1032 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 C2orf40Q9H1Z8 148 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 OR10A4Q9H209 315 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 PRDM13Q9H4Q3 707 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 CHST7Q9NS84 486 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 KRT84Q9NSB2 600 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 KCNK4Q9NYG8 393 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 TMOD4Q9NZQ9 345 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 CLEC1BQ9P126 229 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 FEM1BQ9UK73 627 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 ATP6V0A2Q9Y487 856 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 SNX8Q9Y5X2 465 aa4.78□□□□□ -1.64
GAPLINC-201ENST00000578664 LOC100289279A0A1B0GTE1 492 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 PRSS38A1L453 326 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 KRBA1A5PL33 1030 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 STXBP3O00186 592 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 RTCAO00442 366 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 FYB1O15117 783 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 MYO1BO43795 1136 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 SCGB1D1O95968 90 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 A1BGP04217 495 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 CLEC2LP0C7M8 214 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 BRAFP15056 766 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 PAMP19021 973 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 CD68P34810 354 aaPredicted RBP4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 MSH2P43246 934 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 AFMP43652 599 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 MRE11P49959 708 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 SUMO3P55854 103 aaPredicted RBP4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 SPIRE1Q08AE8 756 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 MALLQ13021 153 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 ADAM15Q13444 863 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 WTAPQ15007 396 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 CCDC62Q6P9F0 684 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 C11orf88Q6PI97 169 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 PHYKPLQ8IUZ5 450 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 DZIP1LQ8IYY4 767 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 CCAR2Q8N163 923 aaKnown RBP4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 C3orf20Q8ND61 904 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 GOT1L1Q8NHS2 421 aaPredicted RBP4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 DCAF11Q8TEB1 546 aa4.77□□□□□ -1.65
GAPLINC-201ENST00000578664 TSPEARQ8WU66 669 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms