RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 PUF60Q9UHX1 559 aaKnown RBP20.07■□□□□ 0.8
COPS7A-216ENST00000543170 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.07■□□□□ 0.8
COPS7A-216ENST00000543170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.06■□□□□ 0.8
COPS7A-216ENST00000543170 NRP1O14786 923 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 NR1I2O75469 434 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 PRPF6O94906 941 aaKnown RBP20.06■□□□□ 0.8
COPS7A-216ENST00000543170 ALDH2P05091 517 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 PRR29P0C7W0 189 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 KCNE1P15382 129 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 GARTP22102 1010 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 DNAJB1P25685 340 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 OSTNP61366 133 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 KMT5BQ4FZB7 885 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 ELOA2Q8IYF1 753 aaPredicted RBP20.06■□□□□ 0.8
COPS7A-216ENST00000543170 GLIS3Q8NEA6 775 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 NSUN3Q9H649 340 aaKnown RBP20.06■□□□□ 0.8
COPS7A-216ENST00000543170 FAN1Q9Y2M0 1017 aa20.06■□□□□ 0.8
COPS7A-216ENST00000543170 EYSQ5T1H1 3165 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 TISP43B9A030 160 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 FSCN2O14926 492 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 KIAA0391O15091 583 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 RHOBTB3O94955 611 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 RPN1P04843 607 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 ADRB2P07550 413 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 ADSSP30520 456 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 SNRPFP62306 86 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 KCNB1Q14721 858 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 SLC10A6Q3KNW5 377 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 DDX53Q86TM3 631 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 TMEM173Q86WV6 379 aaPredicted RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 SYCP3Q8IZU3 236 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 SCFD1Q8WVM8 642 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 POMGNT1Q8WZA1 660 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 CCDC47Q96A33 483 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 TSPAN18Q96SJ8 248 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 SLC38A7Q9NVC3 462 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 MARCH5Q9NX47 278 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 CPSF3Q9UKF6 684 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 AGO2Q9UKV8 859 aaKnown RBP20.05■□□□□ 0.8
COPS7A-216ENST00000543170 ANK1P16157 1881 aa20.05■□□□□ 0.8
COPS7A-216ENST00000543170 SMIM28A0A1B0GU29 152 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 TTC26A0AVF1 554 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 NT5C1B-RDH14C9J2C7 533 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 MEFVO15553 781 aaPredicted RBP20.04■□□□□ 0.8
COPS7A-216ENST00000543170 CXCL8P10145 99 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 OR1G1P47890 313 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 UBE2HP62256 183 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 CD302Q8IX05 232 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 KIAA0895Q8NCT3 520 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 BCL7CQ8WUZ0 217 aaPredicted RBP20.04■□□□□ 0.8
COPS7A-216ENST00000543170 UROC1Q96N76 676 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 CXCL16Q9H2A7 254 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 IKZF4Q9H2S9 585 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 SLC39A2Q9NP94 309 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 MYO7AQ13402 2215 aa20.04■□□□□ 0.8
COPS7A-216ENST00000543170 LDHAP00338 332 aaKnown RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 HOXD13P35453 343 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 TNFSF9P41273 254 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 PPP2R3AQ06190 1150 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 ENOX2Q16206 610 aaKnown RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 SEZ6Q53EL9 994 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 GLRA4Q5JXX5 417 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 ZBTB41Q5SVQ8 909 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 RNF168Q8IYW5 571 aaPredicted RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 MICALL1Q8N3F8 863 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 PPP2R3CQ969Q6 453 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 COLEC11Q9BWP8 271 aa20.03■□□□□ 0.8
COPS7A-216ENST00000543170 RPF1Q9H9Y2 349 aaKnown RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 NGRNQ9NPE2 291 aaKnown RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 CGNQ9P2M7 1197 aaKnown RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 HOOK1Q9UJC3 728 aaKnown RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 PRG3Q9Y2Y8 225 aaPredicted RBP20.03■□□□□ 0.8
COPS7A-216ENST00000543170 TMEM189-UBE2V1I3L0A0 370 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 GADD45BO75293 160 aaPredicted RBP20.02■□□□□ 0.8
COPS7A-216ENST00000543170 EFEMP2O95967 443 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 IRS1P35568 1242 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 STK4Q13043 487 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 HSP90AA2PQ14568 343 aaPredicted RBP20.02■□□□□ 0.8
COPS7A-216ENST00000543170 ARMCX5Q6P1M9 558 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 ZMAT2Q96NC0 199 aaKnown RBP20.02■□□□□ 0.8
COPS7A-216ENST00000543170 TCF25Q9BQ70 676 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 ZBP1Q9H171 429 aa20.02■□□□□ 0.8
COPS7A-216ENST00000543170 FSD2A1L4K1 749 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 CASTOR2A6NHX0 329 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 KINO60870 393 aaKnown RBP20.01■□□□□ 0.79
COPS7A-216ENST00000543170 BMS1Q14692 1282 aaKnown RBP20.01■□□□□ 0.79
COPS7A-216ENST00000543170 KNOP1Q1ED39 458 aaKnown RBP20.01■□□□□ 0.79
COPS7A-216ENST00000543170 TCEAL5Q5H9L2 206 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 C12orf56Q8IXR9 622 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 SPATA20Q8TB22 786 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 CBWD1Q9BRT8 395 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 HERC2P3Q9BVR0 1158 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 VN1R3Q9BXE9 311 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 ASB7Q9H672 318 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 ADAM28Q9UKQ2 775 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 IRAK3Q9Y616 596 aa20.01■□□□□ 0.79
COPS7A-216ENST00000543170 TGFB1I1O43294 461 aa20■□□□□ 0.79
COPS7A-216ENST00000543170 XPOTO43592 962 aaKnown RBP20■□□□□ 0.79
COPS7A-216ENST00000543170 NCK2O43639 380 aa20■□□□□ 0.79
COPS7A-216ENST00000543170 KIF20AO95235 890 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms