RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HYAL1Q12794 435 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 L1TD1Q5T7N2 865 aaKnown RBP13.86□□□□□ -0.19
LSM5-201ENST00000223084 CNNM4Q6P4Q7 775 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 ALKAL1Q6UXT8 129 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 EP400NLQ6ZTU2 488 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 DDX53Q86TM3 631 aaKnown RBP13.86□□□□□ -0.19
LSM5-201ENST00000223084 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 AUTS2Q8WXX7 1259 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
LSM5-201ENST00000223084 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 OLFML3Q9NRN5 406 aa13.86□□□□□ -0.19
LSM5-201ENST00000223084 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
LSM5-201ENST00000223084 FAM237AA0A1B0GTK4 181 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 SMIM28A0A1B0GU29 152 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 HIDE1A8MVS5 230 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 CXCL8P10145 99 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 IGFBP6P24592 240 aaPredicted RBP13.85□□□□□ -0.19
LSM5-201ENST00000223084 CA8P35219 290 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 NRIP1P48552 1158 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 TUSC3Q13454 348 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 NAB2Q15742 525 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 SLC10A6Q3KNW5 377 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 TAS1R1Q7RTX1 841 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 HASPINQ8TF76 798 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 SNX27Q96L92 541 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 ZMAT2Q96NC0 199 aaKnown RBP13.85□□□□□ -0.19
LSM5-201ENST00000223084 PPP1R10Q96QC0 940 aaKnown RBP13.85□□□□□ -0.19
LSM5-201ENST00000223084 ACCSQ96QU6 501 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 MSTO1Q9BUK6 570 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 GOLGA2P5Q9HBQ8 144 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 THEGQ9P2T0 379 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
LSM5-201ENST00000223084 A0A0B4J269 797 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 LINC01565O15544 149 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 FAM189A1O60320 539 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 CXCL14O95715 111 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 CLTAP09496 248 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 ADSSP30520 456 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 ABCD1P33897 745 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 SOX4Q06945 474 aaPredicted RBP13.84□□□□□ -0.19
LSM5-201ENST00000223084 SPAG1Q07617 926 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 XKR4Q5GH76 650 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 UNC13DQ70J99 1090 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 TMEM130Q8N3G9 435 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 HLA-CQ95604 372 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 COLEC11Q9BWP8 271 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 ZBP1Q9H171 429 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 TLE6Q9H808 572 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
LSM5-201ENST00000223084 TOPORSQ9NS56 1045 aaPredicted RBP13.84□□□□□ -0.19
LSM5-201ENST00000223084 CLDND1Q9NY35 253 aa13.84□□□□□ -0.19
LSM5-201ENST00000223084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 CARNS1A5YM72 827 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 OGTO15294 1046 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 KLRC4O43908 158 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 NR1I2O75469 434 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 ZNF202O95125 648 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 ACOT2P49753 483 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 EHHADHQ08426 723 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 SMC1AQ14683 1233 aaKnown RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 PDE12Q6L8Q7 609 aaKnown RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 SYCP3Q8IZU3 236 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 MRPL43Q8N983 215 aaKnown RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 ZSWIM2Q8NEG5 633 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 GPR62Q9BZJ7 368 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
LSM5-201ENST00000223084 CHMP5Q9NZZ3 219 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 CNTN3Q9P232 1028 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 USP25Q9UHP3 1055 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 EXOC7Q9UPT5 735 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 STYXL1Q9Y6J8 313 aa13.83□□□□□ -0.2
LSM5-201ENST00000223084 TCF20Q9UGU0 1960 aaKnown RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 PVALEFA0A1B0GWK0 134 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 LACTBL1A8MY62 500 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 C2CD2LO14523 706 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 TADA2AO75478 443 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 KIF4AO95239 1232 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 EFEMP2O95967 443 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 CTSAP10619 480 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 KCNE1P15382 129 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 KCNA5P22460 613 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 HOXD13P35453 343 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 LTBRP36941 435 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 KCNQ1P51787 676 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 CLCNKBP51801 687 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 DLX2Q07687 328 aaPredicted RBP13.82□□□□□ -0.2
LSM5-201ENST00000223084 ADAM15Q13444 863 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 ALCAMQ13740 583 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 COL19A1Q14993 1142 aa13.82□□□□□ -0.2
LSM5-201ENST00000223084 ENOX2Q16206 610 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms