RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 SMC1AQ14683 1233 aaKnown RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 CASP8Q14790 479 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 PSMD6Q15008 389 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 TDRD10Q5VZ19 366 aaKnown RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 SPOPLQ6IQ16 392 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 CCNI2Q6ZMN8 369 aaPredicted RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 PEX26Q7Z412 305 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 DHX37Q8IY37 1157 aaKnown RBP15.61■□□□□ 0.09
VRK3-217ENST00000599538 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
VRK3-217ENST00000599538 A0A0B4J269 797 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 ANKRD62A6NC57 917 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 H3BQF6 201 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 ATMINO43313 823 aaPredicted RBP15.6■□□□□ 0.09
VRK3-217ENST00000599538 LGR5O75473 907 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 SRGAP2CP0DJJ0 459 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 TXNP10599 105 aaKnown RBP15.6■□□□□ 0.09
VRK3-217ENST00000599538 TNNI1P19237 187 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 GTF2H1P32780 548 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 CLDN10P78369 228 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 FMO1Q01740 532 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 PLCB4Q15147 1175 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 IFI16Q16666 785 aaKnown RBP15.6■□□□□ 0.09
VRK3-217ENST00000599538 HDXQ7Z353 690 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 FMNL3Q8IVF7 1028 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 KCNN1Q92952 543 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 ISCUQ9H1K1 167 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 MROH8Q9H579 483 aa15.6■□□□□ 0.09
VRK3-217ENST00000599538 ADGRA2Q96PE1 1338 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 ZSCAN5CA6NGD5 496 aaPredicted RBP15.59■□□□□ 0.09
VRK3-217ENST00000599538 VNN1O95497 513 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 C4BPAP04003 597 aaKnown RBP15.59■□□□□ 0.09
VRK3-217ENST00000599538 TUBBP07437 444 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 CYP11B1P15538 503 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 GPR162Q16538 588 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 ZACNQ401N2 412 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 USP38Q8NB14 1042 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 BBXQ8WY36 941 aaPredicted RBP15.59■□□□□ 0.09
VRK3-217ENST00000599538 TAF4BQ92750 862 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 MS4A4AQ96JQ5 239 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 MSTO1Q9BUK6 570 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 RBAKQ9NYW8 714 aaPredicted RBP15.59■□□□□ 0.09
VRK3-217ENST00000599538 CEP104O60308 925 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 TNFSF9P41273 254 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 OR5B17Q8NGF7 314 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 MORC4Q8TE76 937 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 DDX1Q92499 740 aaKnown RBP15.59■□□□□ 0.09
VRK3-217ENST00000599538 HES6Q96HZ4 224 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 FNBP1Q96RU3 617 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 TMEM134Q9H6X4 195 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 RNF14Q9UBS8 474 aa15.59■□□□□ 0.09
VRK3-217ENST00000599538 CNTNAP2Q9UHC6 1331 aa15.58■□□□□ 0.09
VRK3-217ENST00000599538 BTBD19C9JJ37 291 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 PDHXO00330 501 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 POLR3GO15318 223 aaPredicted RBP15.58■□□□□ 0.08
VRK3-217ENST00000599538 MSCO60682 206 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 HLA-DRAP01903 254 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 GLI1P08151 1106 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 OAS2P29728 719 aaKnown RBP15.58■□□□□ 0.08
VRK3-217ENST00000599538 COPB2P35606 906 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 LAMTOR4Q0VGL1 99 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 C8orf74Q6P047 294 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 ZBTB33Q86T24 672 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 USP37Q86T82 979 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 RNF149Q8NC42 400 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 ATP8B4Q8TF62 1192 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 VTI1AQ96AJ9 217 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 KRT12Q99456 494 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 RNPEPQ9H4A4 650 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 KIAA1586Q9HCI6 787 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 SUCLA2Q9P2R7 463 aaPredicted RBP15.58■□□□□ 0.08
VRK3-217ENST00000599538 EVPLQ92817 2033 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 SCN4AP35499 1836 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 GRIN3BO60391 1043 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 DCAF12L1Q5VU92 463 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 LMBR1Q8WVP7 490 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 AP1M1Q9BXS5 423 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 CCDC113Q9H0I3 377 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 APOBEC3GQ9HC16 384 aaKnown RBP15.58■□□□□ 0.08
VRK3-217ENST00000599538 KCNG1Q9UIX4 513 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 TMEM59LQ9UK28 342 aa15.58■□□□□ 0.08
VRK3-217ENST00000599538 IGKV6-21A0A0C4DH24 114 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 ESYT3A0FGR9 886 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 DDX3YO15523 660 aaKnown RBP15.57■□□□□ 0.08
VRK3-217ENST00000599538 FAM189A1O60320 539 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 RTN2O75298 545 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 KRT5P13647 590 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 ADORA2AP29274 412 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 ABCD1P33897 745 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 BIRC3Q13489 604 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 TRADDQ15628 312 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 SLFN12LQ6IEE8 588 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 KCNV1Q6PIU1 500 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 PLPPR4Q7Z2D5 763 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 CPNE8Q86YQ8 564 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 BRI3BPQ8WY22 251 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 FAM167AQ96KS9 214 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 MPHOSPH6Q99547 160 aaKnown RBP15.57■□□□□ 0.08
VRK3-217ENST00000599538 STIM2Q9P246 746 aa15.57■□□□□ 0.08
VRK3-217ENST00000599538 UMODL1Q5DID0 1318 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms