RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ASIC2Q16515 512 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 FAM187BQ17R55 369 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 SLC9C1Q4G0N8 1177 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ARHGAP29Q52LW3 1261 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 WDR44Q5JSH3 913 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TMEM63BQ5T3F8 832 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 SFMBT2Q5VUG0 894 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 NOTUMQ6P988 496 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ADGRD1Q6QNK2 874 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 TC2NQ8N9U0 490 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 FBXL13Q8NEE6 735 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 ZNF296Q8WUU4 475 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 CCDC127Q96BQ5 260 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 CEP89Q96ST8 783 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 PPP1R16BQ96T49 567 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 FDXACB1Q9BRP7 624 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 CCDC94Q9BW85 323 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 TARS2Q9BW92 718 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 SEZ6LQ9BYH1 1024 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 DNAI2Q9GZS0 605 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 CCDC113Q9H0I3 377 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 RPF1Q9H9Y2 349 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 TMEM8AQ9HCN3 771 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 PLCB1Q9NQ66 1216 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TOPORSQ9NS56 1045 aaPredicted RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 DMAC2Q9NW81 257 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 MYO6Q9UM54 1294 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 TNFSF13BQ9Y275 285 aa6.71□□□□□ -1.34
LIG3-206ENST00000586058 BZW2Q9Y6E2 419 aaKnown RBP6.71□□□□□ -1.34
LIG3-206ENST00000586058 TTC26A0AVF1 554 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 MBLAC1A4D2B0 266 aaPredicted RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 ANKRD63C9JTQ0 380 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 HAS3O00219 553 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 XPOTO43592 962 aaKnown RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 AKR1B10O60218 316 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 ZC3H11AO75152 810 aaKnown RBP eCLIP6.7□□□□□ -1.34
LIG3-206ENST00000586058 PGK1P00558 417 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 TUBB4AP04350 444 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 ASGR1P07306 291 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 MCF2P10911 925 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 FERP16591 822 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 HSPA6P17066 643 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CCND3P30281 292 aaPredicted RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 STAT1P42224 750 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 MFAP3P55082 362 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 YWHAEP62258 255 aaKnown RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 CCZ1BP86790 482 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CCZ1P86791 482 aaPredicted RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 MBTD1Q05BQ5 628 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 LRMPQ12912 555 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 DRP2Q13474 957 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 TRPC3Q13507 836 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 PSMD6Q15008 389 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 KIZQ2M2Z5 673 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 SLC27A1Q6PCB7 646 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 TRIM65Q6PJ69 517 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CXCL17Q6UXB2 119 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 TSHZ1Q6ZSZ6 1077 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 RRAGAQ7L523 313 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 ENOSF1Q7L5Y1 443 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 ZBTB33Q86T24 672 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 KIAA1328Q86T90 577 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CBWD2Q8IUF1 395 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 WDR49Q8IV35 697 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 BRSK2Q8IWQ3 736 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CCDC170Q8IYT3 715 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 EHBP1Q8NDI1 1231 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CCDC42Q96M95 316 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 ZNF830Q96NB3 372 aaPredicted RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 DNAJC7Q99615 494 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 CGRRF1Q99675 332 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 TSEN34Q9BSV6 310 aaKnown RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 CRACR2AQ9BSW2 395 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 TSGA10Q9BZW7 698 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 NLRC4Q9NPP4 1024 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 HDAC6Q9UBN7 1215 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 APEX2Q9UBZ4 518 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 GTF2IRD1Q9UHL9 959 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 FBXL5Q9UKA1 691 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 SIK3Q9Y2K2 1263 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
LIG3-206ENST00000586058 TRPV2Q9Y5S1 764 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 STYXL1Q9Y6J8 313 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 MROH7Q68CQ1 1323 aa6.7□□□□□ -1.34
LIG3-206ENST00000586058 A0A0B4J269 797 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 A0A0U1RQG5 324 aaPredicted RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 LRRC53A6NM62 1247 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 TISP43B9A030 160 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 PMM2O15305 246 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 TLR3O15455 904 aaKnown RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 KRT86O43790 486 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 ZNF500O60304 480 aaPredicted RBP6.69□□□□□ -1.34
LIG3-206ENST00000586058 CAND2O75155 1236 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 ADAMTS4O75173 837 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 SERPING1P05155 500 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 ADRB2P07550 413 aa6.69□□□□□ -1.34
LIG3-206ENST00000586058 P4HA1P13674 534 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms