RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 GAD1Q99259 594 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 CBWD1Q9BRT8 395 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 PCIF1Q9H4Z3 704 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 UBN1Q9NPG3 1134 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 HCSTQ9UBK5 93 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 AGO2Q9UKV8 859 aaKnown RBP19.05■□□□□ 0.64
TPM1-214ENST00000558544 GIT1Q9Y2X7 761 aa19.05■□□□□ 0.64
TPM1-214ENST00000558544 CHD7Q9P2D1 2997 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 ARL5CA6NH57 179 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 CLIC2O15247 247 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 FAM189A1O60320 539 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 KIF20AO95235 890 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 TNFSF9P41273 254 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 AFF1P51825 1210 aaKnown RBP19.04■□□□□ 0.64
TPM1-214ENST00000558544 MORC3Q14149 939 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 NOMO2Q5JPE7 1267 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 HS2ST1Q7LGA3 356 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 GUF1Q8N442 669 aaKnown RBP19.04■□□□□ 0.64
TPM1-214ENST00000558544 TIFAQ96CG3 184 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 ACAP3Q96P50 834 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 AGPAT3Q9NRZ7 376 aa19.04■□□□□ 0.64
TPM1-214ENST00000558544 COL4A4P53420 1690 aaPredicted RBP19.04■□□□□ 0.64
TPM1-214ENST00000558544 SZT2Q5T011 3432 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 LINC01553A4QN01 128 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 POMCP01189 267 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 PTMSP20962 102 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 BMP6P22004 513 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 GARTP22102 1010 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 PRCPP42785 496 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 SCNN1GP51170 649 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 YARSP54577 528 aaKnown RBP19.03■□□□□ 0.64
TPM1-214ENST00000558544 PPP2R2DQ66LE6 453 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 LRRC43Q8N309 656 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 FIBCD1Q8N539 461 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 ZSWIM2Q8NEG5 633 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 URGCPQ8TCY9 931 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 NOC3LQ8WTT2 800 aaKnown RBP19.03■□□□□ 0.64
TPM1-214ENST00000558544 SAAL1Q96ER3 474 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 RPS6KC1Q96S38 1066 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 MRPL9Q9BYD2 267 aaKnown RBP19.03■□□□□ 0.64
TPM1-214ENST00000558544 CXCL16Q9H2A7 254 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 KCTD10Q9H3F6 313 aa19.03■□□□□ 0.64
TPM1-214ENST00000558544 TYW1Q9NV66 732 aaKnown RBP19.03■□□□□ 0.64
TPM1-214ENST00000558544 MRPL42Q9Y6G3 142 aaKnown RBP19.03■□□□□ 0.64
TPM1-214ENST00000558544 PLXNA4Q9HCM2 1894 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 CXCL8P10145 99 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 ACOT2P49753 483 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 LRRC55Q6ZSA7 311 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 SPRED2Q7Z698 418 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 GTPBP4Q9BZE4 634 aaKnown RBP19.02■□□□□ 0.64
TPM1-214ENST00000558544 SLC28A3Q9HAS3 691 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 TBC1D13Q9NVG8 400 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 MIOSQ9NXC5 875 aa19.02■□□□□ 0.64
TPM1-214ENST00000558544 GOLGA8IPA6NC78 632 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 GOLGA8JA6NMD2 632 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 INPPL1O15357 1258 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 MEFVO15553 781 aaPredicted RBP19.01■□□□□ 0.63
TPM1-214ENST00000558544 CLTAP09496 248 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 CYP2J2P51589 502 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 SNRPFP62306 86 aaKnown RBP19.01■□□□□ 0.63
TPM1-214ENST00000558544 TAP1Q03518 808 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 KYAT1Q16773 422 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 COBLL1Q53SF7 1204 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 SPOUT1Q5T280 376 aaKnown RBP19.01■□□□□ 0.63
TPM1-214ENST00000558544 CCDC183Q5T5S1 534 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 TRIML1Q8N9V2 468 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 GSTCDQ8NEC7 633 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 SNX27Q96L92 541 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 FAM213AQ9BRX8 229 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 TOPORSQ9NS56 1045 aaPredicted RBP19.01■□□□□ 0.63
TPM1-214ENST00000558544 HSPBP1Q9NZL4 362 aa19.01■□□□□ 0.63
TPM1-214ENST00000558544 CPSF3Q9UKF6 684 aaKnown RBP19.01■□□□□ 0.63
TPM1-214ENST00000558544 PDXKO00764 312 aa19■□□□□ 0.63
TPM1-214ENST00000558544 PTGESO14684 152 aa19■□□□□ 0.63
TPM1-214ENST00000558544 CD44P16070 742 aaKnown RBP19■□□□□ 0.63
TPM1-214ENST00000558544 RNASELQ05823 741 aaKnown RBP19■□□□□ 0.63
TPM1-214ENST00000558544 ENOX2Q16206 610 aaKnown RBP19■□□□□ 0.63
TPM1-214ENST00000558544 GLRA4Q5JXX5 417 aa19■□□□□ 0.63
TPM1-214ENST00000558544 CRELD2Q6UXH1 353 aaPredicted RBP19■□□□□ 0.63
TPM1-214ENST00000558544 ADSSL1Q8N142 457 aa19■□□□□ 0.63
TPM1-214ENST00000558544 GPD1LQ8N335 351 aa19■□□□□ 0.63
TPM1-214ENST00000558544 GOLGA5Q8TBA6 731 aa19■□□□□ 0.63
TPM1-214ENST00000558544 RSPH1Q8WYR4 309 aa19■□□□□ 0.63
TPM1-214ENST00000558544 C17orf80Q9BSJ5 609 aa19■□□□□ 0.63
TPM1-214ENST00000558544 CWH43Q9H720 699 aa19■□□□□ 0.63
TPM1-214ENST00000558544 RPF1Q9H9Y2 349 aaKnown RBP19■□□□□ 0.63
TPM1-214ENST00000558544 TMEM63CQ9P1W3 806 aa19■□□□□ 0.63
TPM1-214ENST00000558544 CGNQ9P2M7 1197 aaKnown RBP19■□□□□ 0.63
TPM1-214ENST00000558544 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
TPM1-214ENST00000558544 PLAGL2Q9UPG8 496 aa19■□□□□ 0.63
TPM1-214ENST00000558544 MYO9BQ13459 2157 aa19■□□□□ 0.63
TPM1-214ENST00000558544 CALUO43852 315 aaPredicted RBP18.99■□□□□ 0.63
TPM1-214ENST00000558544 EXTL3O43909 919 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 B4GALT3O60512 393 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 LDHAP00338 332 aaKnown RBP18.99■□□□□ 0.63
TPM1-214ENST00000558544 LINC00271P0C7V0 271 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 PPP2R3AQ06190 1150 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 GRIK3Q13003 919 aa18.99■□□□□ 0.63
TPM1-214ENST00000558544 STIM1Q13586 685 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms