RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 PPP1R2P41236 205 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 SEZ6Q53EL9 994 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 NOMO2Q5JPE7 1267 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 CMTR2Q8IYT2 770 aaKnown RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 FIBCD1Q8N539 461 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 URGCPQ8TCY9 931 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 GAD1Q99259 594 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 CBWD1Q9BRT8 395 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 KCTD10Q9H3F6 313 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 PCIF1Q9H4Z3 704 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 KLK14Q9P0G3 267 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 KIAA0391O15091 583 aaKnown RBP15.43■□□□□ 0.06
SNX6-206ENST00000556162 CLIC2O15247 247 aa15.43■□□□□ 0.06
SNX6-206ENST00000556162 MLH1P40692 756 aa15.43■□□□□ 0.06
SNX6-206ENST00000556162 KLHL40Q2TBA0 621 aa15.43■□□□□ 0.06
SNX6-206ENST00000556162 SKOR2Q2VWA4 1001 aaPredicted RBP15.43■□□□□ 0.06
SNX6-206ENST00000556162 TMEM192Q8IY95 271 aa15.43■□□□□ 0.06
SNX6-206ENST00000556162 SP7Q8TDD2 431 aaPredicted RBP15.43■□□□□ 0.06
SNX6-206ENST00000556162 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
SNX6-206ENST00000556162 MRPL9Q9BYD2 267 aaKnown RBP15.43■□□□□ 0.06
SNX6-206ENST00000556162 YBX2Q9Y2T7 364 aaKnown RBP15.43■□□□□ 0.06
SNX6-206ENST00000556162 LCHNA4D1U4 455 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 CALUO43852 315 aaPredicted RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 FAM189A1O60320 539 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 CA3P07451 260 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 BMP6P22004 513 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 DNAJB2P25686 324 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 ACOT2P49753 483 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 ADSSL1Q8N142 457 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 ZFP42Q96MM3 310 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 RPF1Q9H9Y2 349 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 HSPBP1Q9NZL4 362 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 PTPRSQ13332 1948 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 PSMA7O14818 248 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 EXTL3O43909 919 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 POMCP01189 267 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 TNFSF9P41273 254 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 AFF1P51825 1210 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 RNASELQ05823 741 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 HABP4Q5JVS0 413 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 CAVIN1Q6NZI2 390 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 RBM43Q6ZSC3 357 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 C12orf56Q8IXR9 622 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 GPD1LQ8N335 351 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 TIFAQ96CG3 184 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 SAAL1Q96ER3 474 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 DHTKD1Q96HY7 919 aaPredicted RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 FAM213AQ9BRX8 229 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 NKX2-4Q9H2Z4 354 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 PLEKHA5Q9HAU0 1116 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 KIAA1586Q9HCI6 787 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 TMEM63CQ9P1W3 806 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 CPSF3Q9UKF6 684 aaKnown RBP15.42■□□□□ 0.06
SNX6-206ENST00000556162 TRAF3IP3Q9Y228 551 aa15.42■□□□□ 0.06
SNX6-206ENST00000556162 INPPL1O15357 1258 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 SCNN1GP51170 649 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 CYP2J2P51589 502 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 POU5F1Q01860 360 aaKnown RBP15.41■□□□□ 0.06
SNX6-206ENST00000556162 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
SNX6-206ENST00000556162 NFKBIBQ15653 356 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 SLC10A6Q3KNW5 377 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 ZBTB41Q5SVQ8 909 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 SPOUT1Q5T280 376 aaKnown RBP15.41■□□□□ 0.06
SNX6-206ENST00000556162 XXYLT1Q8NBI6 393 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 FAM193BQ96PV7 902 aaPredicted RBP15.41■□□□□ 0.06
SNX6-206ENST00000556162 SEMA6BQ9H3T3 888 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 TBC1D13Q9NVG8 400 aa15.41■□□□□ 0.06
SNX6-206ENST00000556162 LINC01553A4QN01 128 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 GOLGA8IPA6NC78 632 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 GOLGA8JA6NMD2 632 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 PPP1R3GB7ZBB8 358 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 CXCL8P10145 99 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
SNX6-206ENST00000556162 ENOX2Q16206 610 aaKnown RBP15.4■□□□□ 0.06
SNX6-206ENST00000556162 PPP2R2DQ66LE6 453 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 CENPPQ6IPU0 288 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 CRELD2Q6UXH1 353 aaPredicted RBP15.4■□□□□ 0.06
SNX6-206ENST00000556162 ALKAL1Q6UXT8 129 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 LRRC55Q6ZSA7 311 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 MLKLQ8NB16 471 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 GSTCDQ8NEC7 633 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 FAM212AQ96EL1 285 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 TSG101Q99816 390 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 MIOSQ9NXC5 875 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 MRPL42Q9Y6G3 142 aaKnown RBP15.4■□□□□ 0.06
SNX6-206ENST00000556162 ZNF233A6NK53 670 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 EXOC3O60645 756 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 NR3C1P04150 777 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 THP07101 528 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
SNX6-206ENST00000556162 NLRP12P59046 1061 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 PPP2R3AQ06190 1150 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 MYBPC2Q14324 1141 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 XKR4Q5GH76 650 aa15.4■□□□□ 0.06
SNX6-206ENST00000556162 KLHL10Q6JEL2 608 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms