RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 HSP90AA2PQ14568 343 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-202ENST00000553656 CAMK4Q16566 473 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 KNOP1Q1ED39 458 aaKnown RBP15.11■□□□□ 0.01
TUBB3-202ENST00000553656 BMT2Q1RMZ1 405 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 SLC39A4Q6P5W5 647 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 CEP120Q8N960 986 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
TUBB3-202ENST00000553656 NUP62CLQ9H1M0 184 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 CLSTN2Q9H4D0 955 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 AGO2Q9UKV8 859 aaKnown RBP15.11■□□□□ 0.01
TUBB3-202ENST00000553656 MTUS1Q9ULD2 1270 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 CARNS1A5YM72 827 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 TISP43B9A030 160 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 KIAA0391O15091 583 aaKnown RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 POMCP01189 267 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 GARTP22102 1010 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 MCM4P33991 863 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 ZNF658Q5TYW1 1059 aaPredicted RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 NOC3LQ8WTT2 800 aaKnown RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 ARNTL2Q8WYA1 636 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 ZFP42Q96MM3 310 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 IKZF4Q9H2S9 585 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 RPF1Q9H9Y2 349 aaKnown RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 TYW1Q9NV66 732 aaKnown RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 TBC1D13Q9NVG8 400 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 CGNQ9P2M7 1197 aaKnown RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 PCDHB12Q9Y5F1 795 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 STYXL1Q9Y6J8 313 aa15.1■□□□□ 0.01
TUBB3-202ENST00000553656 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
TUBB3-202ENST00000553656 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
TUBB3-202ENST00000553656 INPPL1O15357 1258 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 LDHAP00338 332 aaKnown RBP15.09■□□□□ 0.01
TUBB3-202ENST00000553656 PTMSP20962 102 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 SCNN1GP51170 649 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 ERVK-21P61565 698 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 GRIK3Q13003 919 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 STIM1Q13586 685 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 SEZ6Q53EL9 994 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 TMEM192Q8IY95 271 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 FBXO22Q8NEZ5 403 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 SPATA20Q8TB22 786 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 CLP1Q92989 425 aaKnown RBP15.09■□□□□ 0.01
TUBB3-202ENST00000553656 C17orf80Q9BSJ5 609 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 HAPLN2Q9GZV7 340 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 CERS4Q9HA82 394 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 AGPAT3Q9NRZ7 376 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 MAN1B1Q9UKM7 699 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 MAPK8IP1Q9UQF2 711 aa15.09■□□□□ 0.01
TUBB3-202ENST00000553656 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0
TUBB3-202ENST00000553656 ZC3H11AO75152 810 aaKnown RBP eCLIP15.08■□□□□ 0
TUBB3-202ENST00000553656 ARHGEF15O94989 841 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 THP07101 528 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 CXCL8P10145 99 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 ADSSP30520 456 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 HOXD13P35453 343 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 PPP1R2P41236 205 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 ALDH7A1P49419 539 aaKnown RBP15.08■□□□□ 0
TUBB3-202ENST00000553656 ACOT2P49753 483 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 EPC2Q52LR7 807 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 LRRC55Q6ZSA7 311 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 GUF1Q8N442 669 aaKnown RBP15.08■□□□□ 0
TUBB3-202ENST00000553656 GPT2Q8TD30 523 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 FAM212AQ96EL1 285 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 SNX27Q96L92 541 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 FAM161BQ96MY7 647 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 ZNF558Q96NG5 402 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 CBWD1Q9BRT8 395 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 FAM213AQ9BRX8 229 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 C11orf84Q9BUA3 381 aaPredicted RBP15.08■□□□□ 0
TUBB3-202ENST00000553656 PLVAPQ9BX97 442 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 PCIF1Q9H4Z3 704 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 PLEKHA5Q9HAU0 1116 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 SLC38A7Q9NVC3 462 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 KIAA1468Q9P260 1216 aa15.08■□□□□ 0
TUBB3-202ENST00000553656 BIN1O00499 593 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 TGFB1I1O43294 461 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 EXTL3O43909 919 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 RB1P06400 928 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 PPM1AP35813 382 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 BMPR1AP36894 532 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 TNFSF9P41273 254 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 AFF1P51825 1210 aaKnown RBP15.07■□□□□ 0
TUBB3-202ENST00000553656 ZBTB41Q5SVQ8 909 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 ISM2Q6H9L7 571 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 SMYD4Q8IYR2 804 aaPredicted RBP15.07■□□□□ 0
TUBB3-202ENST00000553656 GPD1LQ8N335 351 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 TRIML1Q8N9V2 468 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 COLGALT1Q8NBJ5 622 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 SAAL1Q96ER3 474 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 TMEM175Q9BSA9 504 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 TTYH1Q9H313 450 aaPredicted RBP15.07■□□□□ 0
TUBB3-202ENST00000553656 SEMA6BQ9H3T3 888 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 CWH43Q9H720 699 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 NRDE2Q9H7Z3 1164 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 KIAA1586Q9HCI6 787 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 HSPBP1Q9NZL4 362 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 HCSTQ9UBK5 93 aa15.07■□□□□ 0
TUBB3-202ENST00000553656 CPSF3Q9UKF6 684 aaKnown RBP15.07■□□□□ 0
TUBB3-202ENST00000553656 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms