RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 C17orf80Q9BSJ5 609 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 TBC1D13Q9NVG8 400 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 KLK14Q9P0G3 267 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 PCDHA5Q9Y5H7 936 aa20.39■□□□□ 0.85
DDX54-209ENST00000551912 OGTO15294 1046 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 POMCP01189 267 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 LINC00271P0C7V0 271 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 HOXD13P35453 343 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 AFF1P51825 1210 aaKnown RBP20.38■□□□□ 0.85
DDX54-209ENST00000551912 RNASELQ05823 741 aaKnown RBP20.38■□□□□ 0.85
DDX54-209ENST00000551912 KYAT1Q16773 422 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 BMT2Q1RMZ1 405 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 SPRED2Q7Z698 418 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 NELFCDQ8IXH7 590 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 TMEM192Q8IY95 271 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 SPATA20Q8TB22 786 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 ARNTL2Q8WYA1 636 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 POMGNT1Q8WZA1 660 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 ERCC4Q92889 916 aaPredicted RBP20.38■□□□□ 0.85
DDX54-209ENST00000551912 GBP3Q9H0R5 595 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 CWH43Q9H720 699 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 CERS4Q9HA82 394 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 AAASQ9NRG9 546 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 TOPORSQ9NS56 1045 aaPredicted RBP20.38■□□□□ 0.85
DDX54-209ENST00000551912 HCSTQ9UBK5 93 aa20.38■□□□□ 0.85
DDX54-209ENST00000551912 CLTAP09496 248 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 ADSSP30520 456 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 CTNNB1P35222 781 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 SCNN1GP51170 649 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 KNOP1Q1ED39 458 aaKnown RBP20.37■□□□□ 0.85
DDX54-209ENST00000551912 EPC2Q52LR7 807 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 SEZ6Q53EL9 994 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 Q7L0L9 218 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 FAM161BQ96MY7 647 aa20.37■□□□□ 0.85
DDX54-209ENST00000551912 FAM193BQ96PV7 902 aaPredicted RBP20.37■□□□□ 0.85
DDX54-209ENST00000551912 AGO2Q9UKV8 859 aaKnown RBP20.37■□□□□ 0.85
DDX54-209ENST00000551912 FAM189A1O60320 539 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 KIF20AO95235 890 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 LAG3P18627 525 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 GARTP22102 1010 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 BMPR1AP36894 532 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 ARMCX5Q6P1M9 558 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 HS2ST1Q7LGA3 356 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 DEFB123Q8N688 67 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 GSTCDQ8NEC7 633 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 PLVAPQ9BX97 442 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 MIOSQ9NXC5 875 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 CDH23Q9H251 3354 aa20.36■□□□□ 0.85
DDX54-209ENST00000551912 C5orf67F2Z3F1 127 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 ZC3H11AO75152 810 aaKnown RBP eCLIP20.35■□□□□ 0.85
DDX54-209ENST00000551912 RB1P06400 928 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 SNRPFP62306 86 aaKnown RBP20.35■□□□□ 0.85
DDX54-209ENST00000551912 GRIK3Q13003 919 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 GRIN2CQ14957 1233 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 CAMK4Q16566 473 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 FBXO22Q8NEZ5 403 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 GTPBP4Q9BZE4 634 aaKnown RBP20.35■□□□□ 0.85
DDX54-209ENST00000551912 NRDE2Q9H7Z3 1164 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 PCDHB12Q9Y5F1 795 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 RALGAPA2Q2PPJ7 1873 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
DDX54-209ENST00000551912 MYO9BQ13459 2157 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 PTGESO14684 152 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 KIAA0391O15091 583 aaKnown RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 TGFB1I1O43294 461 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 THP07101 528 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 TNFSF9P41273 254 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 ALDH7A1P49419 539 aaKnown RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 ZBTB41Q5SVQ8 909 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 ZNF658Q5TYW1 1059 aaPredicted RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 ALKAL1Q6UXT8 129 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 ZNF280BQ86YH2 543 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 COLGALT1Q8NBJ5 622 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 SNX27Q96L92 541 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 ZNF558Q96NG5 402 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 CBWD1Q9BRT8 395 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 C11orf84Q9BUA3 381 aaPredicted RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 CLSTN2Q9H4D0 955 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 RPF1Q9H9Y2 349 aaKnown RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 AGPAT3Q9NRZ7 376 aa20.34■□□□□ 0.85
DDX54-209ENST00000551912 CGNQ9P2M7 1197 aaKnown RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 CPSF3Q9UKF6 684 aaKnown RBP20.34■□□□□ 0.85
DDX54-209ENST00000551912 KIAA1671Q9BY89 1806 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 CARNS1A5YM72 827 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 EPOPA6NHQ4 379 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 DDHD2O94830 711 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 LDHAP00338 332 aaKnown RBP20.33■□□□□ 0.85
DDX54-209ENST00000551912 CXCL8P10145 99 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 ACOT2P49753 483 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 BCAR1P56945 870 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 SLC10A6Q3KNW5 377 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 XKR4Q5GH76 650 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 KCNT2Q6UVM3 1135 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 GUF1Q8N442 669 aaKnown RBP20.33■□□□□ 0.85
DDX54-209ENST00000551912 GOLGA5Q8TBA6 731 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 GPT2Q8TD30 523 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 P2RX5Q93086 422 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 SAAL1Q96ER3 474 aa20.33■□□□□ 0.85
DDX54-209ENST00000551912 CXCL16Q9H2A7 254 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms